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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA942359" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 8 ✖

bioproject 1

  • PRJNA942359 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13676574 13676574 PRJNA942359_P_NODE_13671_length_252_cov_0.871508_g13556_i0 PRJNA942359 13671 252 0.871508 2.19620016 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 151 2.26e-43   NR MBI3539212.1 2212470 g13556 i0 90.5 2 84 8 100 0 1 252 180 263 MBI3539212.1 ABC transporter substrate-binding protein [Candidatus Eiseniibacteriota bacterium] diamond 504 151 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
26961811 26961811 PRJNA942359_P_NODE_13022_length_253_cov_0.866667_g12907_i0 PRJNA942359 13022 253 0.866667 2.19266751 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 157 3.88e-43   NR HEY7520262.1 2072417 g12907 i0 91.7 0.99604743083004 84 7 99.6 0 2 253 526 609 HEY7520262.1 NADH-quinone oxidoreductase subunit L [Candidatus Methylomirabilota bacterium] diamond 252 157 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27689077 27689077 PRJNA942359_P_NODE_11564_length_265_cov_1.625000_g11449_i0 PRJNA942359 11564 265 1.625 4.30625 Candidatus Babeliales bacterium 2803731 Bacteria Bacteria 164 4.46e-45   NR GMU19053.1 2803731 g11449 i0 88.6 0.99622641509434 88 10 99.6 0 264 1 369 456 GMU19053.1 MAG: ATP-dependent RecD-like DNA helicase [Candidatus Babeliales bacterium] diamond 264 164 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales     Candidatus Babeliales bacterium
29614364 29614364 PRJNA942359_P_NODE_16530_length_248_cov_0.868571_g16415_i0 PRJNA942359 16530 248 0.868571 2.15405608 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 134 2.6e-35   NR MBM3217773.1 2053607 g16415 i0 78 2.95161290322581 82 18 99.2 0 1 246 11 92 MBM3217773.1 amidase [Candidatus Rokuibacteriota bacterium] diamond 732 134 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31384178 31384178 PRJNA942359_P_NODE_12936_length_253_cov_0.866667_g12821_i0 PRJNA942359 12936 253 0.866667 2.19266751 Patescibacteria group bacterium 2052139 Bacteria Bacteria 164 1e-45   NR HVG79372.1 2052139 g12821 i0 96.4 0.99604743083004 84 3 99.6 0 252 1 139 222 HVG79372.1 DUF4340 domain-containing protein [Patescibacteria group bacterium] diamond 252 164 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
32270016 32270016 PRJNA942359_P_NODE_20338_length_242_cov_0.869822_g20223_i0 PRJNA942359 20338 242 0.869822 2.10496924 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 123 7.77e-35   NR HSX78364.1 2890869 g20223 i0 82.6 0.855371900826446 69 12 85.5 0 24 230 3 71 HSX78364.1 hypothetical protein [Candidatus Saccharimonadia bacterium] diamond 207 123 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
32301837 32301837 PRJNA942359_P_NODE_15559_length_249_cov_0.886364_g15444_i0 PRJNA942359 15559 249 0.886364 2.20704636 Candidatus Liptonbacteria bacterium RIFCSPHIGHO2_ 2528273 Bacteria Bacteria 60.8 1.62e-8   NR OGY98410.1 1798647 g15444 i0 57.6 0.710843373493976 59 23 69.9 2 68 241 415 472 OGY98410.1 MAG: hypothetical protein A2855_02680 [Candidatus Liptonbacteria bacterium RIFCSPHIGHO2_01_FULL_57_28] diamond 177 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Liptoniibacteriota         Candidatus Liptonbacteria bacterium RIFCSPHIGHO2_01_FULL_57_28
32586349 32586349 PRJNA942359_P_NODE_10679_length_274_cov_1.253731_g10564_i0 PRJNA942359 10679 274 1.253731 3.43522294 Patescibacteria group bacterium 2052139 Bacteria Bacteria 49.7 9.41e-6   NR MDQ5961338.1 2052139 g10564 i0 50 0.525547445255474 48 24 52.6 0 1 144 4 51 MDQ5961338.1 hypothetical protein [Patescibacteria group bacterium] diamond 144 49.7 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;