RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA940501" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Annelida · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA940501 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9848963 9848963 PRJNA940501_S_NODE_356588_length_156_cov_1.663717_g355770_i0 PRJNA940501 356588 156 1.663717 2.59539852 root 1 Root_unresolved Root_unresolved 102 1.34e-23   NR XP_009028259.1 6412 g355770 i0 84.3 27.4423076923077 51 8 98.1 0 3 155 291 341 XP_009028259.1 hypothetical protein HELRODRAFT_103347 [Helobdella robusta] diamond 4281 102 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
22598889 22598889 PRJNA940501_S_NODE_71078_length_260_cov_3.741935_g70260_i0 PRJNA940501 71078 260 3.741935 9.729031 Capitella teleta 283909 Annelida Annelida 73.2 1.03e-13   NR ELU07708.1 283909 g70260 i0 74.5 3.18461538461538 47 12 54.2 0 3 143 143 189 ELU07708.1 hypothetical protein CAPTEDRAFT_151035 [Capitella teleta] diamond 828 73.2 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
27569126 27569126 PRJNA940501_S_NODE_306224_length_166_cov_1.243902_g305406_i0 PRJNA940501 306224 166 1.243902 2.06487732 Metazoa 33208 Annelida Annelida 46.2 7.56e-4   NR XP_009026649.1 6412 g305406 i0 44.2 5.74698795180723 52 28 92.2 1 12 164 330 381 XP_009026649.1 hypothetical protein HELRODRAFT_193600 [Helobdella robusta] diamond 954 46.2 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
28011422 28011422 PRJNA940501_S_NODE_193385_length_195_cov_1.546053_g192567_i0 PRJNA940501 193385 195 1.546053 3.01480335 Annelida 6340 Annelida Annelida 103 4.85e-24   NR KAK2186173.1 27915 g192567 i0 78.9 13.9692307692308 57 12 87.7 0 3 173 426 482 KAK2186173.1 hypothetical protein NP493_212g07026 [Ridgeia piscesae] diamond 2724 104 0.990384615384615 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
28611183 28611183 PRJNA940501_S_NODE_65367_length_266_cov_2.107623_g64549_i0 PRJNA940501 65367 266 2.107623 5.60627718 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 67 1.35e-10   NR KAK2185879.1 27915 g64549 i0 57.1 2.58270676691729 49 21 55.3 0 1 147 394 442 KAK2185879.1 hypothetical protein NP493_220g03039 [Ridgeia piscesae] diamond 687 67.4 0.99406528189911 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
29368966 29368966 PRJNA940501_S_NODE_397809_length_150_cov_1.317757_g396991_i0 PRJNA940501 397809 150 1.317757 1.9766355 root 1 Root_unresolved Root_unresolved 56.2 1.84e-7   NR CAH1783163.1 6347 g396991 i0 83.9 7.52 31 5 62 0 1 93 413 443 CAH1783163.1 unnamed protein product, partial [Owenia fusiformis] diamond 1128 56.2 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
30593793 30593793 PRJNA940501_S_NODE_224093_length_186_cov_0.930070_g223275_i0 PRJNA940501 224093 186 0.93007 1.7299302 Ridgeia piscesae 27915 Annelida Annelida 41.6 0.0457   NR KAK2193290.1 27915 g223275 i0 52.8 0.580645161290323 36 15 58.1 1 132 25 189 222 KAK2193290.1 hypothetical protein NP493_16g11006 [Ridgeia piscesae] diamond 108 41.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
30973212 30973212 PRJNA940501_S_NODE_351794_length_157_cov_1.631579_g350976_i0 PRJNA940501 351794 157 1.631579 2.56157903 Owenia fusiformis 6347 Annelida Annelida 44.3 0.00335   NR CAH1793439.1 6347 g350976 i0 48.6 0.707006369426752 37 19 70.7 0 124 14 207 243 CAH1793439.1 unnamed protein product [Owenia fusiformis] diamond 111 44.3 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
31517517 31517517 PRJNA940501_S_NODE_361936_length_155_cov_1.741071_g361118_i0 PRJNA940501 361936 155 1.741071 2.69866005 Annelida 6340 Annelida Annelida 51.6 8.3e-6   NR KAK2192639.1 27915 g361118 i0 43.8 11.4967741935484 48 27 92.9 0 7 150 301 348 KAK2192639.1 hypothetical protein NP493_27g03000 [Ridgeia piscesae] diamond 1782 51.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
32459778 32459778 PRJNA940501_S_NODE_377979_length_152_cov_4.311927_g377161_i0 PRJNA940501 377979 152 4.311927 6.55412904 Owenia fusiformis 6347 Annelida Annelida 58.2 3.88e-8   NR CAH1776626.1 6347 g377161 i0 62.5 0.947368421052632 48 18 94.7 0 149 6 978 1025 CAH1776626.1 unnamed protein product [Owenia fusiformis] diamond 144 58.2 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
32655550 32655550 PRJNA940501_S_NODE_47500_length_288_cov_4.444898_g46682_i0 PRJNA940501 47500 288 4.444898 12.80130624 Opisthokonta 33154 Annelida Annelida 99 9.35e-24   NR KAK2168654.1 53620 g46682 i0 63.9 8.03125 83 30 86.5 0 38 286 41 123 KAK2168654.1 hypothetical protein LSH36_15g12056 [Paralvinella palmiformis] diamond 2313 99 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis
32743669 32743669 PRJNA940501_S_NODE_32540_length_317_cov_10.521898_g31722_i0 PRJNA940501 32540 317 10.521898 33.35441666 Helobdella robusta 6412 Annelida Annelida 108 3.2499999999999998e-28   NR XP_009025143.1 6412 g31722 i0 58.9 0.899053627760252 95 39 89.9 0 299 15 7 101 XP_009025143.1 hypothetical protein HELRODRAFT_67827 [Helobdella robusta] diamond 285 108 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
32869471 32869471 PRJNA940501_S_NODE_390680_length_151_cov_0.870370_g389862_i0 PRJNA940501 390680 151 0.87037 1.3142587 Capitella teleta 283909 Annelida Annelida 40.8 0.00795   NR ELT98715.1 283909 g389862 i0 45.2 1.2317880794702 31 17 61.6 0 15 107 2 32 ELT98715.1 hypothetical protein CAPTEDRAFT_61794, partial [Capitella teleta] diamond 186 40.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;