contig_metadata
7 rows where analysis = "diamond", bioproject = "PRJNA940501" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29393686 | 29393686 | PRJNA940501_S_NODE_142669_length_215_cov_1.093023_g141851_i0 | PRJNA940501 | 142669 | 215 | 1.093023 | 2.34999945 | Psychrilyobacter | 623282 | Bacteria | Bacteria | 126 | 1.59e-34 | NR | WP_114641174.1 | 623282 | g141851 | i0 | 94.1 | 0.948837209302326 | 68 | 4 | 94.9 | 0 | 213 | 10 | 131 | 198 | WP_114641174.1 MULTISPECIES: 3-oxoacid CoA-transferase subunit B [Psychrilyobacter] | diamond | 204 | 126 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Psychrilyobacter | |||
| 29526855 | 29526855 | PRJNA940501_S_NODE_272550_length_173_cov_1.769231_g271732_i0 | PRJNA940501 | 272550 | 173 | 1.769231 | 3.06076963 | root | 1 | Root_unresolved | Root_unresolved | 43.9 | 0.00154 | NR | WP_187105689.1 | 859 | g271732 | i0 | 66.7 | 6.69364161849711 | 33 | 11 | 57.2 | 0 | 3 | 101 | 64 | 96 | WP_187105689.1 hypothetical protein, partial [Fusobacterium necrophorum] | diamond | 1158 | 43.9 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium necrophorum | ||
| 29779346 | 29779346 | PRJNA940501_S_NODE_11571_length_440_cov_3.350126_g10765_i0 | PRJNA940501 | 11571 | 440 | 3.350126 | 14.7405544 | Bacteria | 2 | Bacteria | Bacteria | 108 | 2e-24 | NR | WP_314291413.1 | 1852388 | g10765 | i0 | 51.1 | 3.27272727272727 | 94 | 46 | 64.1 | 0 | 159 | 440 | 317 | 410 | WP_314291413.1 DpnII family type II restriction endonuclease [Leptotrichia massiliensis] | diamond | 1440 | 108 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia massiliensis | ||
| 30088370 | 30088370 | PRJNA940501_S_NODE_402252_length_150_cov_0.878505_g401434_i0 | PRJNA940501 | 402252 | 150 | 0.878505 | 1.3177575 | Fusobacterium necrophorum subsp. funduliforme | 143387 | Bacteria | Bacteria | 59.7 | 3.68e-10 | NR | KYM59904.1 | 143387 | g401434 | i0 | 65.8 | 0.76 | 38 | 13 | 76 | 0 | 150 | 37 | 4 | 41 | KYM59904.1 hypothetical protein A2U09_11045 [Fusobacterium necrophorum subsp. funduliforme] | diamond | 114 | 59.7 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium necrophorum | ||
| 31162384 | 31162384 | PRJNA940501_S_NODE_32715_length_317_cov_2.361314_g31897_i0 | PRJNA940501 | 32715 | 317 | 2.361314 | 7.48536538 | Ilyobacter sp. | 3100343 | Bacteria | Bacteria | 43.9 | 0.033 | NR | WP_372715093.1 | 3100343 | g31897 | i0 | 30.8 | 1.01261829652997 | 107 | 65 | 92.7 | 1 | 9 | 302 | 115 | 221 | WP_372715093.1 AAA family ATPase, partial [Ilyobacter sp.] | diamond | 321 | 43.9 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Ilyobacter | Ilyobacter sp. | ||
| 32781671 | 32781671 | PRJNA940501_S_NODE_274120_length_173_cov_1.084615_g273302_i0 | PRJNA940501 | 274120 | 173 | 1.084615 | 1.87638395 | Fusobacterium | 848 | Bacteria | Bacteria | 73.6 | 9.71e-14 | NR | WP_204716624.1 | 850 | g273302 | i0 | 59.6 | 6.91907514450867 | 57 | 23 | 98.8 | 0 | 171 | 1 | 8 | 64 | WP_204716624.1 hypothetical protein [Fusobacterium mortiferum] | diamond | 1197 | 73.6 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium mortiferum | ||
| 32837919 | 32837919 | PRJNA940501_S_NODE_397380_length_150_cov_1.317757_g396562_i0 | PRJNA940501 | 397380 | 150 | 1.317757 | 1.9766355 | Fusobacterium necrophorum | 859 | Bacteria | Bacteria | 51.6 | 7.6e-7 | NR | WP_147369864.1 | 859 | g396562 | i0 | 54.3 | 2.8 | 35 | 16 | 70 | 0 | 2 | 106 | 7 | 41 | WP_147369864.1 hypothetical protein, partial [Fusobacterium necrophorum] | diamond | 420 | 51.6 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium necrophorum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;