RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA939415" and tax_phylum = "candidate division WOR-3"

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tax_superkingdom 1

tax_phylum 1

  • candidate division WOR-3 · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA939415 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27411574 27411574 PRJNA939415_P_NODE_79863_length_254_cov_2.232044_g79441_i0 PRJNA939415 79863 254 2.232044 5.66939176 Bacteria 2 Bacteria Bacteria 44.7 0.00879   NR OPX17648.1 1936077 g79441 i0 54.3 6.48425196850394 35 16 41.3 0 7 111 403 437 OPX17648.1 MAG: hypothetical protein BXT86_05370 [candidate division WOR-3 bacterium 4484_100] diamond 1647 44.7 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium 4484_100
29463213 29463213 PRJNA939415_P_NODE_63670_length_270_cov_2.177665_g63248_i0 PRJNA939415 63670 270 2.177665 5.8796955 Pseudomonadati 3379134 Bacteria Bacteria 60.1 1.78e-9   NR MEO0103191.1 2052148 g63248 i0 45.5 1.45555555555556 55 30 61.1 0 32 196 33 87 MEO0103191.1 WG repeat-containing protein [candidate division WOR-3 bacterium] diamond 393 60.1 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
32523107 32523107 PRJNA939415_P_NODE_8499_length_555_cov_4.302905_g8083_i0 PRJNA939415 8499 555 4.302905 23.88112275 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 48.9 0.00443   NR MBN1694400.1 2052148 g8083 i0 33.3 0.686486486486486 63 42 34.1 0 215 27 191 253 MBN1694400.1 YARHG domain-containing protein [candidate division WOR-3 bacterium] diamond 381 48.9 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
32648635 32648635 PRJNA939415_P_NODE_59800_length_274_cov_1.552239_g59378_i0 PRJNA939415 59800 274 1.552239 4.25313486 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 89.7 1.66e-18   NR MBN2464176.1 2052148 g59378 i0 54.8 0.799270072992701 73 33 79.9 0 220 2 476 548 MBN2464176.1 PAS domain S-box protein [candidate division WOR-3 bacterium] diamond 219 89.7 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;