RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA939415" and tax_phylum = "Candidatus Fervidibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Fervidibacterota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA939415 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29014948 29014948 PRJNA939415_P_NODE_61788_length_272_cov_1.879397_g61366_i0 PRJNA939415 61788 272 1.879397 5.11195984 bacterium HR17 2035412 Bacteria Bacteria 67.4 2.02e-11   NR GBC98498.1 2035412 g61366 i0 63.6 0.606617647058823 55 20 60.7 0 3 167 126 180 GBC98498.1 Guanylate kinase [bacterium HR17] diamond 165 67.4 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter japonicus
29930542 29930542 PRJNA939415_P_NODE_70991_length_263_cov_1.421053_g70569_i0 PRJNA939415 70991 263 1.421053 3.73736939 Candidatus Fervidibacter sp. 3100871 Bacteria Bacteria 70.1 1.11e-11   NR MFA0737382.1 3100871 g70569 i0 45.5 2.00760456273764 88 45 98.1 2 262 5 393 479 MFA0737382.1 hypothetical protein [Candidatus Fervidibacter sp.] diamond 528 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Fervidibacterota       Candidatus Fervidibacter Candidatus Fervidibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;