RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA939415" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 2 ✖

bioproject 1

  • PRJNA939415 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27467597 27467597 PRJNA939415_P_NODE_43283_length_290_cov_2.557604_g42861_i0 PRJNA939415 43283 290 2.557604 7.4170516 Mitovirus sp. 2587224 Viruses Viruses 40.8 0.0483   NR QDH90692.1 2587224 g42861 i0 39.3 0.631034482758621 61 22 52.8 2 178 26 19 74 QDH90692.1 MAG: hypothetical protein H2Rhizo3311660_000002 [Mitovirus sp.] diamond 183 40.8 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
28635926 28635926 PRJNA939415_P_NODE_103367_length_229_cov_5.525641_g102945_i0 PRJNA939415 103367 229 5.525641 12.65371789 Nigrospora sphaerica fusarivirus 1 2877864 Viruses Viruses 146 8.95e-39   NR UBK24763.1 2877864 g102945 i0 94.7 0.982532751091703 75 4 98.3 0 227 3 245 319 UBK24763.1 RNA-dependent RNA polymerase [Nigrospora sphaerica fusarivirus 1] diamond 225 146 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Fusariviridae   Nigrospora sphaerica fusarivirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;