RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA939415" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 11 ✖

bioproject 1

  • PRJNA939415 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17494767 17494767 PRJNA939415_P_NODE_95674_length_241_cov_0.916667_g95252_i0 PRJNA939415 95674 241 0.916667 2.20916747 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 130 5.19e-36   NR EPY27009.1 28005 g95252 i0 78.5 5.90041493775934 79 17 98.3 0 237 1 89 167 EPY27009.1 hypothetical protein STCU_05967 [Strigomonas culicis] diamond 1422 130 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
27537659 27537659 PRJNA939415_P_NODE_65423_length_268_cov_3.076923_g65001_i0 PRJNA939415 65423 268 3.076923 8.24615364 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 57 1.24e-7   NR AYU82034.1 5661 g65001 i0 57.4 3.24626865671642 47 20 52.6 0 126 266 38 84 AYU82034.1 paraflagellar rod component, putative [Leishmania donovani] diamond 870 57.4 0.993031358885017 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania donovani
27562022 27562022 PRJNA939415_P_NODE_86744_length_248_cov_1.857143_g86322_i0 PRJNA939415 86744 248 1.857143 4.60571464 Acrasis kona 1008807 Heterolobosea other_Eukaryota 80.1 1.84e-15   NR KAL0491802.1 1008807 g86322 i0 55.2 0.701612903225806 58 26 70.2 0 246 73 309 366 KAL0491802.1 F-box/LRR-repeat protein [Acrasis kona] diamond 174 80.1 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27657135 27657135 PRJNA939415_P_NODE_55764_length_278_cov_1.668293_g55342_i0 PRJNA939415 55764 278 1.668293 4.63785454 Bodo saltans 75058 Euglenozoa other_Eukaryota 130 6.34e-33   NR CUG86718.1 75058 g55342 i0 70.3 0.982014388489209 91 27 98.2 0 2 274 3824 3914 CUG86718.1 Hypothetical protein, putative [Bodo saltans] diamond 273 130 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27751911 27751911 PRJNA939415_P_NODE_72844_length_261_cov_2.186170_g72422_i0 PRJNA939415 72844 261 2.18617 5.7059037 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 55.5 1.58e-6   NR CAG4711220.1 5763 g72422 i0 56.1 1.31034482758621 57 21 60.9 1 1 159 269 325 CAG4711220.1 unnamed protein product, partial [Naegleria fowleri] diamond 342 55.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28414932 28414932 PRJNA939415_P_NODE_96046_length_240_cov_4.143713_g95624_i0 PRJNA939415 96046 240 4.143713 9.9449112 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 90.9 4.15e-19   NR XP_044568997.1 5763 g95624 i0 62.8 0.975 78 24 92.5 2 1 222 565 641 XP_044568997.1 uncharacterized protein FDP41_007461 [Naegleria fowleri] diamond 234 90.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28541279 28541279 PRJNA939415_P_NODE_81127_length_253_cov_1.355556_g80705_i0 PRJNA939415 81127 253 1.355556 3.42955668 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 131 3.06e-33   NR CAG4712635.1 5763 g80705 i0 74.7 1.96837944664032 83 21 98.4 0 252 4 591 673 CAG4712635.1 unnamed protein product [Naegleria fowleri] diamond 498 131 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
29582634 29582634 PRJNA939415_P_NODE_48410_length_285_cov_2.518868_g47988_i0 PRJNA939415 48410 285 2.518868 7.1787738 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 84.7 1.1e-16   NR XP_015655241.1 157538 g47988 i0 35.8 3.17894736842105 151 38 100 3 285 1 356 503 XP_015655241.1 ATP-binding cassette protein subfamily F member 3 putative (ABCF2) [Leptomonas pyrrhocoris] diamond 906 84.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
30941537 30941537 PRJNA939415_P_NODE_42174_length_291_cov_4.665138_g41752_i0 PRJNA939415 42174 291 4.665138 13.57555158 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 135 5.49e-39   NR XP_002680334.1 5762 g41752 i0 66.7 0.958762886597938 93 31 95.9 0 283 5 13 105 XP_002680334.1 uncharacterized protein NAEGRDRAFT_78792 [Naegleria gruberi] diamond 279 135 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31099230 31099230 PRJNA939415_P_NODE_81015_length_253_cov_1.677778_g80593_i0 PRJNA939415 81015 253 1.677778 4.24477834 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 152 1.03e-44   NR XP_044554967.1 51637 g80593 i0 89.6 0.91304347826087 77 8 91.3 0 233 3 1 77 XP_044554967.1 uncharacterized protein C9374_009650 [Naegleria lovaniensis] diamond 231 152 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
32530016 32530016 PRJNA939415_P_NODE_86999_length_248_cov_1.320000_g86577_i0 PRJNA939415 86999 248 1.32 3.2736 Naegleria 5761 Heterolobosea other_Eukaryota 134 3.39e-34   NR XP_002671488.1 5762 g86577 i0 74.4 3.93145161290323 82 20 99.2 1 246 1 607 687 XP_002671488.1 uncharacterized protein NAEGRDRAFT_73484 [Naegleria gruberi] diamond 975 135 0.992592592592593 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;