RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA939370" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA939370 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31225526 31225526 PRJNA939370_S_NODE_1495_length_224_cov_1.228571_g1443_i0 PRJNA939370 1495 224 1.228571 2.75199904 Tropilaelaps mercedesae 418985 Arthropoda Arthropoda 87 9.58e-20   NR OQR70690.1 418985 g1443 i0 60.9 1.875 69 27 92.4 0 9 215 68 136 OQR70690.1 60S ribosomal protein L26 isoform 1 [Tropilaelaps mercedesae] diamond 420 87 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Mesostigmata Laelapidae Tropilaelaps Tropilaelaps mercedesae
32900651 32900651 PRJNA939370_S_NODE_1740_length_207_cov_1.202532_g1688_i0 PRJNA939370 1740 207 1.202532 2.48924124 Nephila pilipes 299642 Arthropoda Arthropoda 52 9.25e-6   NR GFS44425.1 299642 g1688 i0 42.4 4.59420289855072 66 36 95.7 1 1 198 112 175 GFS44425.1 uncharacterized protein NPIL_439631 [Nephila pilipes] diamond 951 52 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Nephilidae Nephila Nephila pilipes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;