RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA939369" and tax_phylum = "Rhodophyta"

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tax_superkingdom 1

tax_phylum 1

  • Rhodophyta · 1 ✖

bioproject 1

  • PRJNA939369 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_kingdom 0

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30561881 30561881 PRJNA939369_S_NODE_61733_length_248_cov_0.880000_g61316_i0 PRJNA939369 61733 248 0.88 2.1824 Cyanidioschyzon merolae strain 1 45157 Rhodophyta other_Eukaryota 53.5 1.54e-6   NR XP_005537846.1 280699 g61316 i0 68.8 0.580645161290323 48 14 58.1 1 157 14 101 147 XP_005537846.1 hypothetical protein CYME_CMP180C [Cyanidioschyzon merolae strain 10D] diamond 144 53.5 1 Eukaryota     Rhodophyta Bangiophyceae Cyanidiales Cyanidiaceae Cyanidioschyzon Cyanidioschyzon merolae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;