RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA939369" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA939369 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26898549 26898549 PRJNA939369_S_NODE_72301_length_243_cov_0.905882_g71884_i0 PRJNA939369 72301 243 0.905882 2.20129326 Methanocorpusculum sp. 2058474 Archaea Archaea 110 1.51e-28   NR MBR5007884.1 2058474 g71884 i0 62.5 0.987654320987654 80 29 98.8 1 3 242 26 104 MBR5007884.1 hypothetical protein [Methanocorpusculum sp.] diamond 240 110 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.
27972593 27972593 PRJNA939369_S_NODE_1605_length_852_cov_1.431322_g1257_i0 PRJNA939369 1605 852 1.431322 12.19486344 Methanoculleus sp. 90427 Archaea Archaea 203 7.32e-60   NR MCK9307556.1 90427 g1257 i0 59.4 0.633802816901408 180 67 63 3 548 12 1 175 MCK9307556.1 ParB N-terminal domain-containing protein [Methanoculleus sp.] diamond 540 203 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
28098807 28098807 PRJNA939369_S_NODE_18905_length_344_cov_0.911439_g18488_i0 PRJNA939369 18905 344 0.911439 3.13535016 Methanocorpusculum sp. 2058474 Archaea Archaea 49.7 4.61e-4   NR MBQ3569595.1 2058474 g18488 i0 32.3 0.837209302325581 96 63 82.8 2 297 13 2097 2191 MBQ3569595.1 hypothetical protein [Methanocorpusculum sp.] diamond 288 49.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.
30814852 30814852 PRJNA939369_S_NODE_38694_length_279_cov_1.495146_g38277_i0 PRJNA939369 38694 279 1.495146 4.17145734 Methanocorpusculum sp. 2058474 Archaea Archaea 124 1.6699999999999998e-32   NR MCQ2355475.1 2058474 g38277 i0 69.9 1.98924731182796 93 27 98.9 1 278 3 104 196 MCQ2355475.1 phage major capsid protein [Methanocorpusculum sp.] diamond 555 124 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanocorpusculaceae Methanocorpusculum Methanocorpusculum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;