RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA938397" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA938397 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30246381 30246381 PRJNA938397_S_NODE_9752_length_338_cov_67.398671_g9511_i0 PRJNA938397 9752 338 67.398671 227.80750798 Ectropis obliqua nucleopolyhedrovirus 59376 Viruses Viruses 88.2 2.44e-20   NR YP_874214.1 59376 g9511 i0 54.5 0.683431952662722 77 35 68.3 0 297 67 1 77 YP_874214.1 ubiquitin [Ectropis obliqua nucleopolyhedrovirus] diamond 231 88.2 1 Viruses       Naldaviricetes Lefavirales Baculoviridae Alphabaculovirus Alphabaculovirus ecobliquae
31794746 31794746 PRJNA938397_S_NODE_32677_length_193_cov_2.557692_g32436_i0 PRJNA938397 32677 193 2.557692 4.93634556 Iflaviridae sp. 1955145 Viruses Viruses 78.6 4.19e-15   NR XCO48891.1 1955145 g32436 i0 61.4 1.7720207253886 57 22 88.6 0 21 191 69 125 XCO48891.1 MAG: putative ORF1 protein, partial [Iflaviridae sp.] diamond 342 78.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   Iflaviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;