contig_metadata
38 rows where analysis = "diamond", bioproject = "PRJNA938397" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 10184707 | 10184707 | PRJNA938397_S_NODE_51748_length_152_cov_4.086957_g51507_i0 | PRJNA938397 | 51748 | 152 | 4.086957 | 6.21217464 | Undibacterium | 401469 | Bacteria | Bacteria | 98.6 | 8.67e-23 | NR | WP_126126046.1 | 401471 | g51507 | i0 | 98 | 14.8026315789474 | 50 | 1 | 98.7 | 0 | 151 | 2 | 269 | 318 | WP_126126046.1 ATP phosphoribosyltransferase regulatory subunit [Undibacterium parvum] | diamond | 2250 | 98.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium parvum | ||
| 12735386 | 12735386 | PRJNA938397_S_NODE_34450_length_188_cov_1.490066_g34209_i0 | PRJNA938397 | 34450 | 188 | 1.490066 | 2.80132408 | Undibacterium luofuense | 2828733 | Bacteria | Bacteria | 107 | 3.0099999999999997e-25 | NR | WP_212688639.1 | 2828733 | g34209 | i0 | 96.6 | 0.925531914893617 | 58 | 2 | 92.6 | 0 | 187 | 14 | 46 | 103 | WP_212688639.1 endopeptidase La [Undibacterium luofuense] | diamond | 174 | 107 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium luofuense | ||
| 13667368 | 13667368 | PRJNA938397_S_NODE_45991_length_161_cov_45.774194_g45750_i0 | PRJNA938397 | 45991 | 161 | 45.774194 | 73.69645234 | Aliiroseovarius sp. PrR | 1872442 | Bacteria | Bacteria | 79.3 | 1.44e-15 | NR | WP_163038402.1 | 2706883 | g45750 | i0 | 100 | 1.3416149068323 | 36 | 0 | 67.1 | 0 | 54 | 161 | 1 | 36 | WP_163038402.1 translation elongation factor EF-1 subunit alpha, partial [Aliiroseovarius sp. PrR006] | diamond | 216 | 79.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Aliiroseovarius | Aliiroseovarius sp. PrR006 | ||
| 18764588 | 18764588 | PRJNA938397_S_NODE_24995_length_221_cov_1.858696_g24754_i0 | PRJNA938397 | 24995 | 221 | 1.858696 | 4.10771816 | Burkholderiales | 80840 | Bacteria | Bacteria | 128 | 2.93e-33 | NR | WP_186911628.1 | 1344949 | g24754 | i0 | 87.3 | 15.6108597285068 | 71 | 9 | 96.4 | 0 | 1 | 213 | 346 | 416 | WP_186911628.1 flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [Undibacterium jejuense] | diamond | 3450 | 128 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium jejuense | ||
| 25139903 | 25139903 | PRJNA938397_S_NODE_46520_length_161_cov_1.564516_g46279_i0 | PRJNA938397 | 46520 | 161 | 1.564516 | 2.51887076 | Undibacterium luofuense | 2828733 | Bacteria | Bacteria | 110 | 8.61e-27 | NR | WP_212688295.1 | 2828733 | g46279 | i0 | 100 | 0.968944099378882 | 52 | 0 | 96.9 | 0 | 157 | 2 | 384 | 435 | WP_212688295.1 adenylosuccinate synthase [Undibacterium luofuense] | diamond | 156 | 110 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium luofuense | ||
| 27000162 | 27000162 | PRJNA938397_S_NODE_15522_length_278_cov_11.041494_g15281_i0 | PRJNA938397 | 15522 | 278 | 11.041494 | 30.69535332 | root | 1 | Root_unresolved | Root_unresolved | 48.9 | 4.03e-5 | NR | WP_409197496.1 | 573 | g15281 | i0 | 60 | 13.6079136690647 | 30 | 12 | 32.4 | 0 | 259 | 170 | 31 | 60 | WP_409197496.1 LIM domain-containing protein, partial [Klebsiella pneumoniae] | diamond | 3783 | 49.3 | 0.991886409736308 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 27024977 | 27024977 | PRJNA938397_S_NODE_48422_length_157_cov_6.425000_g48181_i0 | PRJNA938397 | 48422 | 157 | 6.425 | 10.08725 | Undibacterium squillarum | 1131567 | Bacteria | Bacteria | 64.3 | 3.48e-12 | NR | GGX35714.1 | 1131567 | g48181 | i0 | 93.8 | 0.611464968152866 | 32 | 2 | 61.1 | 0 | 96 | 1 | 1 | 32 | GGX35714.1 hypothetical protein GCM10010946_11510 [Undibacterium squillarum] | diamond | 96 | 64.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium squillarum | ||
| 27372973 | 27372973 | PRJNA938397_S_NODE_30483_length_200_cov_2.282209_g30242_i0 | PRJNA938397 | 30483 | 200 | 2.282209 | 4.564418 | Duganella dendranthematis | 2728021 | Bacteria | Bacteria | 79.7 | 2.12e-17 | NR | WP_169110112.1 | 2728021 | g30242 | i0 | 57.4 | 0.915 | 61 | 26 | 91.5 | 0 | 6 | 188 | 5 | 65 | WP_169110112.1 hypothetical protein [Duganella dendranthematis] | diamond | 183 | 79.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Duganella | Duganella dendranthematis | ||
| 27783321 | 27783321 | PRJNA938397_S_NODE_50024_length_155_cov_1.830508_g49783_i0 | PRJNA938397 | 50024 | 155 | 1.830508 | 2.8372874 | Pelomonas aquatica | 431058 | Bacteria | Bacteria | 76.3 | 1.2e-16 | NR | WP_268153976.1 | 431058 | g49783 | i0 | 100 | 0.754838709677419 | 39 | 0 | 75.5 | 0 | 155 | 39 | 42 | 80 | WP_268153976.1 cold shock domain-containing protein [Pelomonas aquatica] | diamond | 117 | 76.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Pelomonas aquatica | ||
| 27821938 | 27821938 | PRJNA938397_S_NODE_33204_length_191_cov_5.831169_g32963_i0 | PRJNA938397 | 33204 | 191 | 5.831169 | 11.13753279 | root | 1 | Root_unresolved | Root_unresolved | 45.4 | 0.00203 | NR | MCG8312420.1 | 1891229 | g32963 | i0 | 48.8 | 11.5916230366492 | 41 | 21 | 64.4 | 0 | 14 | 136 | 241 | 281 | MCG8312420.1 serine protease [Pseudomonadales bacterium] | diamond | 2214 | 45.8 | 0.991266375545852 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadales bacterium | ||||
| 27948075 | 27948075 | PRJNA938397_S_NODE_42305_length_169_cov_1.621212_g42064_i0 | PRJNA938397 | 42305 | 169 | 1.621212 | 2.73984828 | Undibacterium | 401469 | Bacteria | Bacteria | 95.9 | 1.1e-21 | NR | WP_325396680.1 | 1914977 | g42064 | i0 | 83 | 2.82248520710059 | 53 | 9 | 94.1 | 0 | 160 | 2 | 254 | 306 | WP_325396680.1 branched-chain amino acid ABC transporter substrate-binding protein [Undibacterium sp.] | diamond | 477 | 96.3 | 0.995846313603323 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium sp. | ||
| 28193411 | 28193411 | PRJNA938397_S_NODE_16386_length_271_cov_12.179487_g16145_i0 | PRJNA938397 | 16386 | 271 | 12.179487 | 33.00640977 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 103 | 5.24e-25 | NR | MCG8436024.1 | 1913989 | g16145 | i0 | 60.9 | 3.85239852398524 | 69 | 27 | 76.4 | 0 | 6 | 212 | 152 | 220 | MCG8436024.1 class I SAM-dependent methyltransferase [Gammaproteobacteria bacterium] | diamond | 1044 | 103 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 28414770 | 28414770 | PRJNA938397_S_NODE_47546_length_159_cov_2.401639_g47305_i0 | PRJNA938397 | 47546 | 159 | 2.401639 | 3.81860601 | Xanthomonas campestris | 339 | Bacteria | Bacteria | 40.8 | 0.0203 | NR | WP_181922234.1 | 339 | g47305 | i0 | 38.1 | 0.792452830188679 | 42 | 26 | 79.2 | 0 | 129 | 4 | 51 | 92 | WP_181922234.1 hypothetical protein [Xanthomonas campestris] | diamond | 126 | 40.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Xanthomonas | Xanthomonas campestris | ||
| 28604096 | 28604096 | PRJNA938397_S_NODE_19527_length_250_cov_1.807512_g19286_i0 | PRJNA938397 | 19527 | 250 | 1.807512 | 4.51878 | Undibacterium squillarum | 1131567 | Bacteria | Bacteria | 177 | 1.52e-52 | NR | WP_189356088.1 | 1131567 | g19286 | i0 | 100 | 0.984 | 82 | 0 | 98.4 | 0 | 3 | 248 | 246 | 327 | WP_189356088.1 YjhT family mutarotase [Undibacterium squillarum] | diamond | 246 | 177 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium squillarum | ||
| 28604099 | 28604099 | PRJNA938397_S_NODE_47647_length_159_cov_1.377049_g47406_i0 | PRJNA938397 | 47647 | 159 | 1.377049 | 2.18950791 | Undibacterium luofuense | 2828733 | Bacteria | Bacteria | 84.7 | 2.01e-18 | NR | WP_230427864.1 | 2828733 | g47406 | i0 | 97.8 | 1.69811320754717 | 45 | 1 | 84.9 | 0 | 3 | 137 | 59 | 103 | WP_230427864.1 MarC family protein [Undibacterium luofuense] | diamond | 270 | 84.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium luofuense | ||
| 28698982 | 28698982 | PRJNA938397_S_NODE_37107_length_181_cov_1.902778_g36866_i0 | PRJNA938397 | 37107 | 181 | 1.902778 | 3.44402818 | Undibacterium luofuense | 2828733 | Bacteria | Bacteria | 118 | 4.47e-29 | NR | WP_212687123.1 | 2828733 | g36866 | i0 | 93.2 | 0.977900552486188 | 59 | 4 | 97.8 | 0 | 177 | 1 | 382 | 440 | WP_212687123.1 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor [Undibacterium luofuense] | diamond | 177 | 118 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium luofuense | ||
| 28761822 | 28761822 | PRJNA938397_S_NODE_1687_length_546_cov_322.909627_g1521_i0 | PRJNA938397 | 1687 | 546 | 322.909627 | 1763.08656342 | Salmonella enterica | 28901 | Bacteria | Bacteria | 79 | 1.94e-15 | NR | MDR5387564.1 | 90371 | g1521 | i0 | 43.5 | 0.467032967032967 | 85 | 47 | 46.2 | 1 | 544 | 293 | 24 | 108 | MDR5387564.1 DUF3421 domain-containing protein [Salmonella enterica subsp. enterica serovar Typhimurium] | diamond | 255 | 79 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 28824816 | 28824816 | PRJNA938397_S_NODE_43768_length_166_cov_1.713178_g43527_i0 | PRJNA938397 | 43768 | 166 | 1.713178 | 2.84387548 | Salmonella enterica | 28901 | Bacteria | Bacteria | 53.9 | 2.17e-7 | NR | MDR5387555.1 | 90371 | g43527 | i0 | 38.2 | 1.8433734939759 | 55 | 34 | 99.4 | 0 | 1 | 165 | 52 | 106 | MDR5387555.1 DUF3421 domain-containing protein [Salmonella enterica subsp. enterica serovar Typhimurium] | diamond | 306 | 53.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 29046197 | 29046197 | PRJNA938397_S_NODE_27108_length_212_cov_3.794286_g26867_i0 | PRJNA938397 | 27108 | 212 | 3.794286 | 8.04388632 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 45.4 | 0.00113 | NR | WP_395588902.1 | 251699 | g26867 | i0 | 51.1 | 0.636792452830189 | 45 | 16 | 58 | 3 | 7 | 129 | 70 | 112 | WP_395588902.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 135 | 45.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 29266928 | 29266928 | PRJNA938397_S_NODE_47669_length_159_cov_0.885246_g47428_i0 | PRJNA938397 | 47669 | 159 | 0.885246 | 1.40754114 | Undibacterium luofuense | 2828733 | Bacteria | Bacteria | 115 | 2.18e-28 | NR | WP_230427602.1 | 2828733 | g47428 | i0 | 96.2 | 1 | 53 | 2 | 100 | 0 | 159 | 1 | 148 | 200 | WP_230427602.1 ATP-binding protein [Undibacterium luofuense] | diamond | 159 | 115 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium luofuense | ||
| 29393534 | 29393534 | PRJNA938397_S_NODE_8369_length_358_cov_43.467290_g8128_i0 | PRJNA938397 | 8369 | 358 | 43.46729 | 155.6128982 | Rickettsia endosymbiont of Cantharis rufa | 3066248 | Bacteria | Bacteria | 42 | 0.0439 | NR | WP_341787376.1 | 3066248 | g8128 | i0 | 40 | 0.377094972067039 | 45 | 27 | 37.7 | 0 | 314 | 180 | 1 | 45 | WP_341787376.1 hypothetical protein [Rickettsia endosymbiont of Cantharis rufa] | diamond | 135 | 42 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rickettsiales | Rickettsiaceae | Rickettsia | Rickettsia endosymbiont of Cantharis rufa | ||
| 29708754 | 29708754 | PRJNA938397_S_NODE_33230_length_191_cov_5.038961_g32989_i0 | PRJNA938397 | 33230 | 191 | 5.038961 | 9.62441551 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 41.2 | 0.0125 | NR | MCP4486165.1 | 1913989 | g32989 | i0 | 50 | 0.534031413612565 | 34 | 17 | 53.4 | 0 | 189 | 88 | 30 | 63 | MCP4486165.1 hypothetical protein [Gammaproteobacteria bacterium] | diamond | 102 | 41.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 29803794 | 29803794 | PRJNA938397_S_NODE_47071_length_160_cov_1.447154_g46830_i0 | PRJNA938397 | 47071 | 160 | 1.447154 | 2.3154464 | Undibacterium sp. | 1914977 | Bacteria | Bacteria | 95.9 | 4.8599999999999996e-23 | NR | MDO9192751.1 | 1914977 | g46830 | i0 | 97.8 | 3.45 | 46 | 1 | 86.3 | 0 | 158 | 21 | 72 | 117 | MDO9192751.1 class I SAM-dependent methyltransferase [Undibacterium sp.] | diamond | 552 | 95.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium sp. | ||
| 30189907 | 30189907 | PRJNA938397_S_NODE_47092_length_160_cov_0.975610_g46851_i0 | PRJNA938397 | 47092 | 160 | 0.97561 | 1.560976 | Oxalobacteraceae | 75682 | Bacteria | Bacteria | 92.8 | 1.88e-22 | NR | WP_290972345.1 | 1890675 | g46851 | i0 | 92.3 | 4.875 | 52 | 4 | 97.5 | 0 | 5 | 160 | 65 | 116 | WP_290972345.1 F0F1 ATP synthase subunit epsilon [Herbaspirillum sp.] | diamond | 780 | 93.6 | 0.991452991452991 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum sp. | ||
| 30348498 | 30348498 | PRJNA938397_S_NODE_41792_length_170_cov_2.060150_g41551_i0 | PRJNA938397 | 41792 | 170 | 2.06015 | 3.502255 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 69.3 | 5.76e-12 | NR | HEY4554920.1 | 72226 | g41551 | i0 | 85.7 | 4.32352941176471 | 35 | 5 | 61.8 | 0 | 1 | 105 | 442 | 476 | HEY4554920.1 adenosylhomocysteinase [Lysobacter sp.] | diamond | 735 | 69.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Lysobacter | Lysobacter sp. | ||
| 30474469 | 30474469 | PRJNA938397_S_NODE_26093_length_216_cov_4.648045_g25852_i0 | PRJNA938397 | 26093 | 216 | 4.648045 | 10.0397772 | Pseudomaricurvus | 1458243 | Bacteria | Bacteria | 67.4 | 5.17e-11 | NR | WP_166163884.1 | 1166482 | g25852 | i0 | 76.2 | 2.91666666666667 | 42 | 8 | 58.3 | 1 | 6 | 131 | 496 | 535 | WP_166163884.1 carboxyl transferase domain-containing protein [Pseudomaricurvus alcaniphilus] | diamond | 630 | 67.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Cellvibrionales | Cellvibrionaceae | Pseudomaricurvus | Pseudomaricurvus alcaniphilus | ||
| 30720006 | 30720006 | PRJNA938397_S_NODE_35474_length_185_cov_3.168919_g35233_i0 | PRJNA938397 | 35474 | 185 | 3.168919 | 5.86250015 | Undibacterium luofuense | 2828733 | Bacteria | Bacteria | 95.1 | 2.3499999999999994e-23 | NR | WP_212688163.1 | 2828733 | g35233 | i0 | 98.1 | 0.843243243243243 | 52 | 1 | 84.3 | 0 | 158 | 3 | 1 | 52 | WP_212688163.1 hypothetical protein [Undibacterium luofuense] | diamond | 156 | 95.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium luofuense | ||
| 30846507 | 30846507 | PRJNA938397_S_NODE_31694_length_196_cov_2.245283_g31453_i0 | PRJNA938397 | 31694 | 196 | 2.245283 | 4.40075468 | Undibacterium aquatile | 1537398 | Bacteria | Bacteria | 96.3 | 1.25e-21 | NR | WP_190478555.1 | 1537398 | g31453 | i0 | 82.8 | 0.979591836734694 | 64 | 11 | 98 | 0 | 192 | 1 | 23 | 86 | WP_190478555.1 phage major capsid protein [Undibacterium aquatile] | diamond | 192 | 96.3 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium aquatile | ||
| 30941461 | 30941461 | PRJNA938397_S_NODE_3834_length_453_cov_142.468750_g3621_i0 | PRJNA938397 | 3834 | 453 | 142.46875 | 645.3834375 | Salmonella enterica | 28901 | Bacteria | Bacteria | 150 | 7.25e-44 | NR | MDR5387555.1 | 90371 | g3621 | i0 | 79.1 | 0.56953642384106 | 86 | 17 | 57 | 1 | 3 | 260 | 32 | 116 | MDR5387555.1 DUF3421 domain-containing protein [Salmonella enterica subsp. enterica serovar Typhimurium] | diamond | 258 | 150 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Salmonella | Salmonella enterica | ||
| 31043398 | 31043398 | PRJNA938397_S_NODE_30975_length_198_cov_6.490683_g30734_i0 | PRJNA938397 | 30975 | 198 | 6.490683 | 12.85155234 | Klebsiella | 570 | Bacteria | Bacteria | 42 | 0.0147 | NR | MDU7247873.1 | 573 | g30734 | i0 | 41.4 | 2.63636363636364 | 58 | 31 | 83.3 | 2 | 23 | 187 | 8 | 65 | MDU7247873.1 hypothetical protein [Klebsiella pneumoniae] | diamond | 522 | 42 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 31612255 | 31612255 | PRJNA938397_S_NODE_8216_length_361_cov_10.583333_g7975_i0 | PRJNA938397 | 8216 | 361 | 10.583333 | 38.20583213 | Roseovarius | 74030 | Bacteria | Bacteria | 76.6 | 1.46e-13 | NR | WP_080457744.1 | 1570360 | g7975 | i0 | 52.9 | 3.39058171745152 | 68 | 32 | 56.5 | 0 | 6 | 209 | 177 | 244 | WP_080457744.1 P-loop NTPase [Roseovarius sp. A-2] | diamond | 1224 | 76.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Roseobacteraceae | Roseovarius | Roseovarius sp. A-2 | ||
| 31731592 | 31731592 | PRJNA938397_S_NODE_40857_length_172_cov_1.274074_g40616_i0 | PRJNA938397 | 40857 | 172 | 1.274074 | 2.19140728 | Undibacterium squillarum | 1131567 | Bacteria | Bacteria | 93.6 | 6.28e-21 | NR | WP_189356088.1 | 1131567 | g40616 | i0 | 100 | 0.802325581395349 | 46 | 0 | 80.2 | 0 | 4 | 141 | 14 | 59 | WP_189356088.1 YjhT family mutarotase [Undibacterium squillarum] | diamond | 138 | 93.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium squillarum | ||
| 32016401 | 32016401 | PRJNA938397_S_NODE_22998_length_230_cov_9.056995_g22757_i0 | PRJNA938397 | 22998 | 230 | 9.056995 | 20.8310885 | Rhizomicrobium sp. | 1978228 | Bacteria | Bacteria | 40.8 | 0.0413 | NR | HEX2594300.1 | 1978228 | g22757 | i0 | 40.5 | 0.547826086956522 | 42 | 25 | 54.8 | 0 | 3 | 128 | 57 | 98 | HEX2594300.1 ubiquitin-like protein [Rhizomicrobium sp.] | diamond | 126 | 40.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Micropepsales | Micropepsaceae | Rhizomicrobium | Rhizomicrobium sp. | ||
| 32023527 | 32023527 | PRJNA938397_S_NODE_51058_length_153_cov_4.008621_g50817_i0 | PRJNA938397 | 51058 | 153 | 4.008621 | 6.13319013 | Undibacterium | 401469 | Bacteria | Bacteria | 70.9 | 1.34e-12 | NR | MBI3286263.1 | 1891238 | g50817 | i0 | 81 | 3.29411764705882 | 42 | 8 | 82.4 | 0 | 4 | 129 | 594 | 635 | MBI3286263.1 threonine--tRNA ligase [Burkholderiales bacterium] | diamond | 504 | 71.2 | 0.995786516853933 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales bacterium | ||||
| 32079675 | 32079675 | PRJNA938397_S_NODE_39378_length_175_cov_4.449275_g39137_i0 | PRJNA938397 | 39378 | 175 | 4.449275 | 7.78623125 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 43.1 | 0.0111 | NR | MED5531126.1 | 1977087 | g39137 | i0 | 53.8 | 0.668571428571429 | 39 | 18 | 66.9 | 0 | 168 | 52 | 146 | 184 | MED5531126.1 TCR/Tet family MFS transporter [Pseudomonadota bacterium] | diamond | 117 | 43.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 32079676 | 32079676 | PRJNA938397_S_NODE_48038_length_158_cov_3.231405_g47797_i0 | PRJNA938397 | 48038 | 158 | 3.231405 | 5.1056199 | Undibacterium squillarum | 1131567 | Bacteria | Bacteria | 77 | 9.49e-15 | NR | WP_229793100.1 | 1131567 | g47797 | i0 | 97.7 | 0.835443037974684 | 44 | 1 | 83.5 | 0 | 157 | 26 | 10 | 53 | WP_229793100.1 methyl-accepting chemotaxis protein [Undibacterium squillarum] | diamond | 132 | 77 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium squillarum | ||
| 32308561 | 32308561 | PRJNA938397_S_NODE_50099_length_155_cov_1.127119_g49858_i0 | PRJNA938397 | 50099 | 155 | 1.127119 | 1.74703445 | Undibacterium | 401469 | Bacteria | Bacteria | 108 | 2.44e-26 | NR | WP_186861445.1 | 2762295 | g49858 | i0 | 100 | 2.90322580645161 | 50 | 0 | 96.8 | 0 | 150 | 1 | 54 | 103 | WP_186861445.1 maltoporin [Undibacterium griseum] | diamond | 450 | 108 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium griseum | ||
| 32806262 | 32806262 | PRJNA938397_S_NODE_37860_length_179_cov_1.718310_g37619_i0 | PRJNA938397 | 37860 | 179 | 1.71831 | 3.0757749 | Undibacterium squillarum | 1131567 | Bacteria | Bacteria | 125 | 5.35e-33 | NR | WP_189356088.1 | 1131567 | g37619 | i0 | 98.3 | 0.988826815642458 | 59 | 1 | 98.9 | 0 | 1 | 177 | 160 | 218 | WP_189356088.1 YjhT family mutarotase [Undibacterium squillarum] | diamond | 177 | 125 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Undibacterium | Undibacterium squillarum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;