contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJNA938397" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28105781 | 28105781 | PRJNA938397_S_NODE_7425_length_374_cov_13.035608_g7186_i0 | PRJNA938397 | 7425 | 374 | 13.035608 | 48.75317392 | root | 1 | Root_unresolved | Root_unresolved | 117 | 7.91e-31 | NR | MFG1554821.1 | 1280 | g7186 | i0 | 61.9 | 7.78877005347594 | 97 | 35 | 76.2 | 2 | 1 | 285 | 31 | 127 | MFG1554821.1 ferritin [Staphylococcus aureus] | diamond | 2913 | 117 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 29298729 | 29298729 | PRJNA938397_S_NODE_14209_length_290_cov_7.557312_g13968_i0 | PRJNA938397 | 14209 | 290 | 7.557312 | 21.9162048 | Candidatus Limivivens sp. | 3048869 | Bacteria | Bacteria | 44.3 | 0.0189 | NR | MDY3920029.1 | 3048869 | g13968 | i0 | 51.4 | 0.382758620689655 | 37 | 18 | 38.3 | 0 | 126 | 236 | 15 | 51 | MDY3920029.1 Ig-like domain-containing protein [Candidatus Limivivens sp.] | diamond | 111 | 44.3 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Candidatus Limivivens | Candidatus Limivivens sp. | ||
| 31232468 | 31232468 | PRJNA938397_S_NODE_13355_length_298_cov_10.409962_g13114_i0 | PRJNA938397 | 13355 | 298 | 10.409962 | 31.02168676 | root | 1 | Root_unresolved | Root_unresolved | 112 | 2.84e-29 | NR | MFG1554821.1 | 1280 | g13114 | i0 | 70.7 | 4.53020134228188 | 75 | 22 | 75.5 | 0 | 288 | 64 | 54 | 128 | MFG1554821.1 ferritin [Staphylococcus aureus] | diamond | 1350 | 112 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 31257236 | 31257236 | PRJNA938397_S_NODE_35235_length_185_cov_14.770270_g34994_i0 | PRJNA938397 | 35235 | 185 | 14.77027 | 27.3249995 | Bacillota bacterium | 1879010 | Bacteria | Bacteria | 77.4 | 4.3e-15 | NR | MBQ2867348.1 | 1879010 | g34994 | i0 | 53.3 | 3.90810810810811 | 60 | 28 | 97.3 | 0 | 182 | 3 | 57 | 116 | MBQ2867348.1 galactose mutarotase [Bacillota bacterium] | diamond | 723 | 77.4 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 31794747 | 31794747 | PRJNA938397_S_NODE_42497_length_168_cov_5.992366_g42256_i0 | PRJNA938397 | 42497 | 168 | 5.992366 | 10.06717488 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 77 | 3.27e-15 | NR | MBQ6058656.1 | 2044939 | g42256 | i0 | 82.6 | 2.60714285714286 | 46 | 8 | 82.1 | 0 | 6 | 143 | 206 | 251 | MBQ6058656.1 pyrroline-5-carboxylate reductase [Clostridia bacterium] | diamond | 438 | 77 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 32491228 | 32491228 | PRJNA938397_S_NODE_19339_length_251_cov_3.551402_g19098_i0 | PRJNA938397 | 19339 | 251 | 3.551402 | 8.91401902 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 65.5 | 3.88e-10 | NR | MBR3076521.1 | 2485925 | g19098 | i0 | 59.6 | 1.12350597609562 | 47 | 19 | 56.2 | 0 | 7 | 147 | 381 | 427 | MBR3076521.1 hypothetical protein [Oscillospiraceae bacterium] | diamond | 282 | 65.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;