contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA938397" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13667291 | 13667291 | PRJNA938397_S_NODE_44291_length_165_cov_1.562500_g44050_i0 | PRJNA938397 | 44291 | 165 | 1.5625 | 2.578125 | Limibacter armeniacum | 466084 | Bacteria | Bacteria | 90.1 | 2.59e-19 | NR | WP_334245523.1 | 466084 | g44050 | i0 | 84.6 | 9.45454545454546 | 52 | 8 | 94.5 | 0 | 8 | 163 | 642 | 693 | WP_334245523.1 methylmalonyl-CoA mutase [Limibacter armeniacum] | diamond | 1560 | 90.1 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flammeovirgaceae | Limibacter | Limibacter armeniacum | |
| 26874099 | 26874099 | PRJNA938397_S_NODE_39101_length_176_cov_1.942446_g38860_i0 | PRJNA938397 | 39101 | 176 | 1.942446 | 3.41870496 | root | 1 | Root_unresolved | Root_unresolved | 61.6 | 3.26e-9 | NR | WP_132773138.1 | 28453 | g38860 | i0 | 57.4 | 13.0397727272727 | 54 | 22 | 92 | 1 | 176 | 15 | 13 | 65 | WP_132773138.1 MULTISPECIES: glycerol kinase GlpK [Sphingobacterium] | diamond | 2295 | 62 | 0.993548387096774 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriales | Sphingobacteriaceae | Sphingobacterium | ||
| 28667362 | 28667362 | PRJNA938397_S_NODE_37087_length_181_cov_2.305556_g36846_i0 | PRJNA938397 | 37087 | 181 | 2.305556 | 4.17305636 | Pricia mediterranea | 3076079 | Bacteria | Bacteria | 45.4 | 0.00159 | NR | WP_314016521.1 | 3076079 | g36846 | i0 | 64.3 | 1.39226519337017 | 28 | 10 | 46.4 | 0 | 3 | 86 | 208 | 235 | WP_314016521.1 6-phosphogluconolactonase [Pricia mediterranea] | diamond | 252 | 45.4 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Pricia | Pricia mediterranea | |
| 28951608 | 28951608 | PRJNA938397_S_NODE_22828_length_231_cov_7.458763_g22587_i0 | PRJNA938397 | 22828 | 231 | 7.458763 | 17.22974253 | Chitinophagales bacterium | 2448779 | Bacteria | Bacteria | 62.8 | 3.89e-10 | NR | MFN8261091.1 | 2448779 | g22587 | i0 | 54.7 | 2.75324675324675 | 53 | 24 | 68.8 | 0 | 3 | 161 | 103 | 155 | MFN8261091.1 TspO/MBR family protein [Chitinophagales bacterium] | diamond | 636 | 62.8 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagales bacterium | |||
| 29431730 | 29431730 | PRJNA938397_S_NODE_25829_length_217_cov_4.722222_g25588_i0 | PRJNA938397 | 25829 | 217 | 4.722222 | 10.24722174 | Bacteroidota | 976 | Bacteria | Bacteria | 42.4 | 0.0349 | NR | MBQ1276413.1 | 2021391 | g25588 | i0 | 51.6 | 1.34101382488479 | 31 | 15 | 42.9 | 0 | 18 | 110 | 375 | 405 | MBQ1276413.1 phosphoribosylformylglycinamidine synthase subunit PurQ [Flavobacteriales bacterium] | diamond | 291 | 42.7 | 0.992974238875878 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriales bacterium | |||
| 29551096 | 29551096 | PRJNA938397_S_NODE_41510_length_170_cov_6.496241_g41269_i0 | PRJNA938397 | 41510 | 170 | 6.496241 | 11.0436097 | Fidelibacterota bacterium | 2026760 | Bacteria | Bacteria | 58.9 | 2.63e-8 | NR | MBD23917.1 | 2026760 | g41269 | i0 | 54 | 7.2 | 50 | 23 | 88.2 | 0 | 2 | 151 | 328 | 377 | MBD23917.1 hypothetical protein [Fidelibacterota bacterium] | diamond | 1224 | 58.9 | 1 | Bacteria | FCB group | Pseudomonadati | Fidelibacterota | Fidelibacterota bacterium | |||||
| 29677223 | 29677223 | PRJNA938397_S_NODE_21490_length_238_cov_6.930348_g21249_i0 | PRJNA938397 | 21490 | 238 | 6.930348 | 16.49422824 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 44.3 | 0.00822 | NR | MEI7724864.1 | 1898104 | g21249 | i0 | 46.8 | 0.592436974789916 | 47 | 22 | 59.2 | 2 | 94 | 234 | 125 | 168 | MEI7724864.1 polysaccharide deacetylase family protein [Bacteroidota bacterium] | diamond | 141 | 44.3 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 32111404 | 32111404 | PRJNA938397_S_NODE_31238_length_197_cov_7.025000_g30997_i0 | PRJNA938397 | 31238 | 197 | 7.025 | 13.83925 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 62 | 3.01e-9 | NR | NLV52593.1 | 2030927 | g30997 | i0 | 74.3 | 4.29441624365482 | 35 | 9 | 53.3 | 0 | 192 | 88 | 324 | 358 | NLV52593.1 galactose mutarotase [Bacteroidales bacterium] | diamond | 846 | 62 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 32238232 | 32238232 | PRJNA938397_S_NODE_39778_length_174_cov_4.883212_g39537_i0 | PRJNA938397 | 39778 | 174 | 4.883212 | 8.49678888 | Candidatus Hydrogenedentota bacterium | 2030809 | Bacteria | Bacteria | 42.7 | 0.0146 | NR | MCH7958893.1 | 2030809 | g39537 | i0 | 64 | 1.32758620689655 | 25 | 9 | 43.1 | 0 | 5 | 79 | 427 | 451 | MCH7958893.1 protoporphyrinogen oxidase [Candidatus Hydrogenedentota bacterium] | diamond | 231 | 42.7 | 1 | Bacteria | FCB group | Pseudomonadati | Candidatus Hydrogenedentota | Candidatus Hydrogenedentota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;