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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA937226" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 7 ✖

bioproject 1

  • PRJNA937226 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27972579 27972579 PRJNA937226_S_NODE_9105_length_251_cov_2.113861_g8978_i0 PRJNA937226 9105 251 2.113861 5.30579111 Betapolyomavirus macacae 1891767 Viruses Viruses 42.7 0.0406   NR AAK29054.1 1891767 g8978 i0 59.4 0.382470119521912 32 13 38.2 0 129 224 506 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 96 42.7 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
28888134 28888134 PRJNA937226_S_NODE_1468_length_478_cov_7.918415_g1343_i0 PRJNA937226 1468 478 7.918415 37.8500237 Gammaretrovirus murleu 3428959 Viruses Viruses 324 3.709999999999999e-107   NR 8WUS_E 11801 g1343 i0 99.4 2.99372384937239 159 1 99.8 0 478 2 171 329 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 1431 324 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
30593595 30593595 PRJNA937226_S_NODE_29673_length_158_cov_2.321101_g29546_i0 PRJNA937226 29673 158 2.321101 3.66733958 Escherichia phage Copypasta 3096133 Viruses Viruses 55.5 1.18e-8   NR WPH57058.1 3096133 g29546 i0 80 1.13924050632911 30 6 57 0 90 1 1 30 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 180 55.5 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
31004480 31004480 PRJNA937226_S_NODE_14794_length_209_cov_3.543750_g14667_i0 PRJNA937226 14794 209 3.54375 7.4064375 Inoviridae sp. 2219103 Viruses Viruses 55.1 1.05e-6   NR XOE94850.1 2219103 g14667 i0 45.3 0.91866028708134 64 35 91.9 0 17 208 19 82 XOE94850.1 MAG: hypothetical protein [Inoviridae sp.] diamond 192 55.1 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
31067826 31067826 PRJNA937226_S_NODE_22775_length_176_cov_1.448819_g22648_i0 PRJNA937226 22775 176 1.448819 2.54992144 Klebsiella phage vB_KaeM_KaAlpha 2591367 Viruses Viruses 39.3 0.0479   NR QEG13108.1 2591367 g22648 i0 40 0.767045454545455 45 27 76.7 0 38 172 21 65 QEG13108.1 hypothetical protein KAALPHA_71 [Klebsiella phage vB_KaeM_KaAlpha] diamond 135 39.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Straboviridae Karamvirus Karamvirus pg7
32869224 32869224 PRJNA937226_S_NODE_1900_length_437_cov_8.940722_g1773_i0 PRJNA937226 1900 437 8.940722 39.07095514 Moloney murine leukemia virus 11801 Viruses Viruses 287 8.259999999999999e-87   NR NP_057933.2 11801 g1773 i0 97.9 4.96338672768879 145 3 99.5 0 435 1 1156 1300 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 2169 287 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
32876194 32876194 PRJNA937226_S_NODE_7680_length_266_cov_2.396313_g7553_i0 PRJNA937226 7680 266 2.396313 6.37419258 Viruses 10239 Viruses Viruses 154 2.26e-45   NR DAF52311.1 2827786 g7553 i0 80.7 1.98496240601504 88 17 99.2 0 1 264 110 197 DAF52311.1 MAG TPA: tail tubular protein [Siphoviridae sp. ct7Qv4] diamond 528 155 0.993548387096774 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Siphoviridae sp. ct7Qv4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;