RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA937226" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA937226 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30593596 30593596 PRJNA937226_S_NODE_6073_length_288_cov_1.958159_g5946_i0 PRJNA937226 6073 288 1.958159 5.63949792 Tilletiaria anomala UBC 951 1037660 Fungi Fungi 142 1.5e-38   NR XP_013240054.1 1037660 g5946 i0 76.5 0.84375 81 19 84.4 0 37 279 301 381 XP_013240054.1 Undecaprenyl diphosphate synthase [Tilletiaria anomala UBC 951] diamond 243 142 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Georgefischeriales Tilletiariaceae Tilletiaria Tilletiaria anomala
31036334 31036334 PRJNA937226_S_NODE_28115_length_162_cov_10.433628_g27988_i0 PRJNA937226 28115 162 10.433628 16.90247736 Mycena vulgaris 1033282 Fungi Fungi 41.2 0.0431   NR KAJ6517669.1 1033282 g27988 i0 41.7 0.666666666666667 36 21 66.7 0 160 53 237 272 KAJ6517669.1 hypothetical protein DFH09DRAFT_1287733 [Mycena vulgaris] diamond 108 41.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;