contig_metadata
9 rows where analysis = "diamond", bioproject = "PRJNA937226" and tax_phylum = "Bacteroidota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18763561 | 18763561 | PRJNA937226_S_NODE_13495_length_217_cov_1.547619_g13368_i0 | PRJNA937226 | 13495 | 217 | 1.547619 | 3.35833323 | Prevotella sp. | 59823 | Bacteria | Bacteria | 152 | 6e-41 | NR | MBD9230008.1 | 59823 | g13368 | i0 | 94.4 | 0.981566820276498 | 71 | 4 | 98.2 | 0 | 215 | 3 | 23 | 93 | MBD9230008.1 DUF4982 domain-containing protein [Prevotella sp.] | diamond | 213 | 152 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella sp. | |
| 26961525 | 26961525 | PRJNA937226_S_NODE_10962_length_235_cov_2.763441_g10835_i0 | PRJNA937226 | 10962 | 235 | 2.763441 | 6.49408635 | Prevotella sp. | 59823 | Bacteria | Bacteria | 113 | 1.17e-30 | NR | MBR2035444.1 | 59823 | g10835 | i0 | 98.4 | 0.778723404255319 | 61 | 1 | 77.9 | 0 | 53 | 235 | 1 | 61 | MBR2035444.1 membrane protein insertase YidC [Prevotella sp.] | diamond | 183 | 113 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Prevotella | Prevotella sp. | |
| 27625409 | 27625409 | PRJNA937226_S_NODE_12584_length_223_cov_1.195402_g12457_i0 | PRJNA937226 | 12584 | 223 | 1.195402 | 2.66574646 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 133 | 6.289999999999998e-35 | NR | MEE1081819.1 | 2030927 | g12457 | i0 | 94.5 | 0.982062780269058 | 73 | 4 | 98.2 | 0 | 3 | 221 | 6 | 78 | MEE1081819.1 hypothetical protein [Bacteroidales bacterium] | diamond | 219 | 133 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 28484820 | 28484820 | PRJNA937226_S_NODE_16626_length_200_cov_2.754967_g16499_i0 | PRJNA937226 | 16626 | 200 | 2.754967 | 5.509934 | Bacteroides | 816 | Bacteria | Bacteria | 113 | 4.33e-31 | NR | MBO5795928.1 | 29523 | g16499 | i0 | 91.4 | 3.48 | 58 | 5 | 87 | 0 | 26 | 199 | 1 | 58 | MBO5795928.1 type II toxin-antitoxin system prevent-host-death family antitoxin [Bacteroides sp.] | diamond | 696 | 114 | 0.991228070175439 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidaceae | Bacteroides | Bacteroides sp. | |
| 29930405 | 29930405 | PRJNA937226_S_NODE_3491_length_347_cov_2.268456_g3364_i0 | PRJNA937226 | 3491 | 347 | 2.268456 | 7.87154232 | Alistipes sp. | 1872444 | Bacteria | Bacteria | 164 | 2.64e-49 | NR | MBO5044251.1 | 1872444 | g3364 | i0 | 100 | 0.726224783861671 | 84 | 0 | 72.6 | 0 | 95 | 346 | 1 | 84 | MBO5044251.1 nucleoside deaminase [Alistipes sp.] | diamond | 252 | 164 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Alistipes | Alistipes sp. | |
| 29961810 | 29961810 | PRJNA937226_S_NODE_19811_length_186_cov_2.992701_g19684_i0 | PRJNA937226 | 19811 | 186 | 2.992701 | 5.56642386 | Chitinophagaceae bacterium | 1869212 | Bacteria | Bacteria | 42 | 0.0327 | NR | MBC7875087.1 | 1869212 | g19684 | i0 | 41.4 | 0.935483870967742 | 58 | 32 | 93.5 | 2 | 12 | 185 | 176 | 231 | MBC7875087.1 PspC domain-containing protein [Chitinophagaceae bacterium] | diamond | 174 | 42 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 30663898 | 30663898 | PRJNA937226_S_NODE_28173_length_162_cov_5.327434_g28046_i0 | PRJNA937226 | 28173 | 162 | 5.327434 | 8.63044308 | Bacteroidota | 976 | Bacteria | Bacteria | 101 | 2.87e-26 | NR | HLO81779.1 | 1869212 | g28046 | i0 | 86.8 | 1.96296296296296 | 53 | 7 | 98.1 | 0 | 160 | 2 | 6 | 58 | HLO81779.1 type II toxin-antitoxin system PemK/MazF family toxin [Chitinophagaceae bacterium] | diamond | 318 | 101 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Chitinophagaceae bacterium | ||
| 31605261 | 31605261 | PRJNA937226_S_NODE_13476_length_217_cov_1.857143_g13349_i0 | PRJNA937226 | 13476 | 217 | 1.857143 | 4.03000031 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 109 | 1.24e-26 | NR | MBR4978503.1 | 2030927 | g13349 | i0 | 94.7 | 0.788018433179724 | 57 | 3 | 78.8 | 0 | 1 | 171 | 291 | 347 | MBR4978503.1 type I asparaginase [Bacteroidales bacterium] | diamond | 171 | 109 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 31700099 | 31700099 | PRJNA937226_S_NODE_8917_length_253_cov_1.274510_g8790_i0 | PRJNA937226 | 8917 | 253 | 1.27451 | 3.2245103 | Segatella copri | 165179 | Bacteria | Bacteria | 169 | 5.73e-50 | NR | MEE1460156.1 | 165179 | g8790 | i0 | 100 | 0.99604743083004 | 84 | 0 | 99.6 | 0 | 253 | 2 | 158 | 241 | MEE1460156.1 hypothetical protein [Segatella copri] | diamond | 252 | 169 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Segatella | Segatella copri |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;