RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA934472" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA934472 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29645573 29645573 PRJNA934472_P_NODE_36310_length_248_cov_0.880000_g35932_i0 PRJNA934472 36310 248 0.88 2.1824 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 42.7 0.0384   NR HLH76150.1 2785449 g35932 i0 35.1 0.895161290322581 74 34 89.5 4 3 224 245 304 HLH76150.1 MFS transporter [Candidatus Binataceae bacterium] diamond 222 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
31162133 31162133 PRJNA934472_P_NODE_36375_length_248_cov_0.880000_g35997_i0 PRJNA934472 36375 248 0.88 2.1824 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 93.6 5.14e-20   NR MFQ5853582.1 2838779 g35997 i0 58.1 0.895161290322581 74 31 89.5 0 246 25 482 555 MFQ5853582.1 amino acid adenylation domain-containing protein [Candidatus Binatia bacterium] diamond 222 93.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;