RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA934472" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 3 ✖

bioproject 1

  • PRJNA934472 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29077802 29077802 PRJNA934472_P_NODE_18668_length_336_cov_1.171103_g18291_i0 PRJNA934472 18668 336 1.171103 3.93490608 Streptomyces phage SparkleGoddess 2283305 Viruses Viruses 104 3.41e-25   NR AXH68751.1 2283305 g18291 i0 50.9 1.95535714285714 110 41 87.5 2 43 336 6 114 AXH68751.1 major tail protein [Streptomyces phage SparkleGoddess] diamond 657 104 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Stanwilliamsviridae Gilsonvirus Gilsonvirus comrade
30758761 30758761 PRJNA934472_P_NODE_37414_length_245_cov_0.895349_g37036_i0 PRJNA934472 37414 245 0.895349 2.19360505 root 1 Root_unresolved Root_unresolved 58.9 7.74e-8   NR YP_001429638.1 458639 g37036 i0 41.7 1.48163265306122 60 35 73.5 0 181 2 1123 1182 YP_001429638.1 endolysin [Bacillus phage 0305phi8-36] diamond 363 58.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Bacillus phage 0305phi8-36
30878032 30878032 PRJNA934472_P_NODE_28334_length_278_cov_1.502439_g27956_i0 PRJNA934472 28334 278 1.502439 4.17678042 uncultured Caudovirales phage 2100421 Viruses Viruses 62.4 5.12e-9   NR CAB4131244.1 2100421 g27956 i0 48.5 0.712230215827338 66 31 70.1 2 274 80 234 297 CAB4131244.1 DNA primase/polymerase, bifunctional, N-terminal [uncultured Caudovirales phage] diamond 198 62.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;