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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA934472" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA934472 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29645573 29645573 PRJNA934472_P_NODE_36310_length_248_cov_0.880000_g35932_i0 PRJNA934472 36310 248 0.88 2.1824 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 42.7 0.0384   NR HLH76150.1 2785449 g35932 i0 35.1 0.895161290322581 74 34 89.5 4 3 224 245 304 HLH76150.1 MFS transporter [Candidatus Binataceae bacterium] diamond 222 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
30278104 30278104 PRJNA934472_P_NODE_38932_length_241_cov_0.916667_g38554_i0 PRJNA934472 38932 241 0.916667 2.20916747 Minisyncoccota bacterium 2053589 Bacteria Bacteria 95.5 2.58e-22   NR MDD4804609.1 2053589 g38554 i0 50 0.995850622406639 80 40 99.6 0 1 240 97 176 MDD4804609.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 240 95.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31162133 31162133 PRJNA934472_P_NODE_36375_length_248_cov_0.880000_g35997_i0 PRJNA934472 36375 248 0.88 2.1824 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 93.6 5.14e-20   NR MFQ5853582.1 2838779 g35997 i0 58.1 0.895161290322581 74 31 89.5 0 246 25 482 555 MFQ5853582.1 amino acid adenylation domain-containing protein [Candidatus Binatia bacterium] diamond 222 93.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31327495 31327495 PRJNA934472_P_NODE_27735_length_281_cov_1.274038_g27357_i0 PRJNA934472 27735 281 1.274038 3.58004678 Bacteria 2 Bacteria Bacteria 55.5 1.88e-6   NR PIP25852.1 1974677 g27357 i0 34 3.08540925266904 97 58 99.3 2 281 3 315 409 PIP25852.1 MAG: hypothetical protein COX32_01165 [Candidatus Moranbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_41_28] diamond 867 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moranbacteria bacterium CG23_combo_of_CG06-09_8_20_14_all_41_28
31478860 31478860 PRJNA934472_P_NODE_35676_length_250_cov_0.870056_g35298_i0 PRJNA934472 35676 250 0.870056 2.17514 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 62.8 2.89e-9   NR PYN43175.1 2053607 g35298 i0 89.7 0.696 29 3 34.8 0 248 162 301 329 PYN43175.1 MAG: hypothetical protein DME00_27470, partial [Candidatus Rokuibacteriota bacterium] diamond 174 62.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31636750 31636750 PRJNA934472_P_NODE_7296_length_519_cov_1.773543_g6979_i0 PRJNA934472 7296 519 1.773543 9.20468817 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 118 1.16e-29   NR RMD61733.1 2762014 g6979 i0 57.8 0.739884393063584 128 46 69.4 4 360 1 1 128 RMD61733.1 MAG: hypothetical protein D6833_07845, partial [Candidatus Parcubacteria bacterium] diamond 384 118 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;