RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA934332" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA934332 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4738940 4738940 PRJNA934332_P_NODE_444_length_888_cov_7.825767_g379_i0 PRJNA934332 444 888 7.825767 69.49281096 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 130 4.34e-32   NR TEB19254.1 2494336 g379 i0 34.1 0.902027027027027 267 154 84.1 7 843 97 1 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 801 130 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
17488884 17488884 PRJNA934332_P_NODE_334_length_1012_cov_8.125666_g277_i0 PRJNA934332 334 1012 8.125666 82.23173992 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 174 1.23e-48   NR TEB19254.1 2494336 g277 i0 42.3 0.785573122529644 265 141 75.9 5 58 825 2 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 795 174 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
27751764 27751764 PRJNA934332_P_NODE_404_length_929_cov_2.477804_g341_i0 PRJNA934332 404 929 2.477804 23.01879916 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 171 6.05e-48   NR TEB19254.1 2494336 g341 i0 42.8 0.852529601722282 264 139 82.3 5 23 787 3 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 792 171 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016
32586053 32586053 PRJNA934332_P_NODE_1619_length_478_cov_3.145679_g1532_i0 PRJNA934332 1619 478 3.145679 15.03634562 Perkinsus sp. BL_2 28001 SAR_Eukaryotes SAR_Eukaryotes 102 2.2299999999999998e-23   NR TEB19254.1 2494336 g1532 i0 42.3 0.815899581589958 130 70 81 2 455 69 138 263 TEB19254.1 hypothetical protein C9890_0250 [Perkinsus sp. BL_2016] diamond 390 102 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus sp. BL_2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;