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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA934332" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 32 ✖

tax_kingdom 1

bioproject 1

  • PRJNA934332 · 32 ✖

analysis 1

  • diamond · 32 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8563607 8563607 PRJNA934332_P_NODE_7087_length_258_cov_1.281081_g7000_i0 PRJNA934332 7087 258 1.281081 3.30518898 Labilithrix sp. 1971228 Bacteria Bacteria 90.5 5.67e-19   NR MBX3224684.1 1971228 g7000 i0 58.8 0.930232558139535 80 33 93 0 245 6 4 83 MBX3224684.1 serine/threonine protein kinase [Labilithrix sp.] diamond 240 90.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Labilitrichaceae Labilithrix Labilithrix sp.
18762257 18762257 PRJNA934332_P_NODE_10455_length_243_cov_0.905882_g10368_i0 PRJNA934332 10455 243 0.905882 2.20129326 Archangium sp. 1872627 Bacteria Bacteria 151 1.76e-41   NR MBL8938691.1 1872627 g10368 i0 98.8 2 81 1 100 0 243 1 10 90 MBL8938691.1 protein kinase [Archangium sp.] diamond 486 151 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
26613259 26613259 PRJNA934332_P_NODE_10461_length_243_cov_0.905882_g10374_i0 PRJNA934332 10461 243 0.905882 2.20129326 Myxococcales bacterium 2026763 Bacteria Bacteria 93.6 4.66e-20   NR MCC6335223.1 2026763 g10374 i0 55 2.96296296296296 80 36 98.8 0 240 1 367 446 MCC6335223.1 family 43 glycosylhydrolase [Myxococcales bacterium] diamond 720 93.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
26810471 26810471 PRJNA934332_P_NODE_9461_length_246_cov_0.890173_g9374_i0 PRJNA934332 9461 246 0.890173 2.18982558 Bacteria 2 Bacteria Bacteria 93.6 2.93e-20   NR MBW1877613.1 2026735 g9374 i0 59.3 3.9390243902439 81 33 98.8 0 2 244 251 331 MBW1877613.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 969 93.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27341203 27341203 PRJNA934332_P_NODE_7743_length_251_cov_0.865169_g7656_i0 PRJNA934332 7743 251 0.865169 2.17157419 Myxococcales bacterium 2026763 Bacteria Bacteria 69.3 1.76e-11   NR MBL9002945.1 2026763 g7656 i0 50 0.956175298804781 80 39 95.6 1 1 240 423 501 MBL9002945.1 ribonuclease J [Myxococcales bacterium] diamond 240 69.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27688809 27688809 PRJNA934332_P_NODE_11064_length_241_cov_1.833333_g10977_i0 PRJNA934332 11064 241 1.833333 4.41833253 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 74.3 2.66e-13   NR MBK04146.1 2026735 g10977 i0 45 0.995850622406639 80 42 97.1 1 239 6 356 435 MBK04146.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 240 74.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27783295 27783295 PRJNA934332_P_NODE_6244_length_273_cov_1.230000_g6157_i0 PRJNA934332 6244 273 1.23 3.3579 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 90.9 6.26e-19   NR MBN8554749.1 2026735 g6157 i0 50 0.989010989010989 90 45 98.9 0 3 272 409 498 MBN8554749.1 MMPL family transporter [Deltaproteobacteria bacterium] diamond 270 90.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28130578 28130578 PRJNA934332_P_NODE_5585_length_284_cov_1.597156_g5498_i0 PRJNA934332 5585 284 1.597156 4.53592304 Myxococcota bacterium 2818507 Bacteria Bacteria 52.8 1.67e-5   NR MEM6959678.1 2818507 g5498 i0 32.5 2.63028169014085 83 53 85.6 2 277 35 108 189 MEM6959678.1 AMP-binding protein [Myxococcota bacterium] diamond 747 52.8 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28358348 28358348 PRJNA934332_P_NODE_1446_length_505_cov_1.034722_g1361_i0 PRJNA934332 1446 505 1.034722 5.2253461 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 224 7.17e-68   NR MSP61786.1 2026763 g1361 i0 61.7 2.97623762376238 167 64 99.2 0 3 503 4 170 MSP61786.1 argininosuccinate lyase [Myxococcales bacterium] diamond 1503 225 0.995555555555556 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28382998 28382998 PRJNA934332_P_NODE_3666_length_339_cov_0.796992_g3579_i0 PRJNA934332 3666 339 0.796992 2.70180288 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 82.8 9.82e-16   NR RME42097.1 2026735 g3579 i0 40.4 8.08849557522124 114 65 98.2 1 338 6 475 588 RME42097.1 MAG: long-chain fatty acid--CoA ligase [Deltaproteobacteria bacterium] diamond 2742 82.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28414749 28414749 PRJNA934332_P_NODE_5026_length_296_cov_1.035874_g4939_i0 PRJNA934332 5026 296 1.035874 3.06618704 Myxococcota bacterium 2818507 Bacteria Bacteria 57.8 3.74e-7   NR MFT5432576.1 2818507 g4939 i0 35.6 1.05405405405405 104 54 98.3 5 5 295 6 103 MFT5432576.1 hypothetical protein [Myxococcota bacterium] diamond 312 57.8 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28611118 28611118 PRJNA934332_P_NODE_5467_length_286_cov_1.910798_g5380_i0 PRJNA934332 5467 286 1.910798 5.46488228 Bacteria 2 Bacteria Bacteria 84.3 1.39e-16   NR MBL6975149.1 2026735 g5380 i0 47.9 2.01398601398601 96 49 99.7 1 1 285 296 391 MBL6975149.1 amidase [Deltaproteobacteria bacterium] diamond 576 84.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28737422 28737422 PRJNA934332_P_NODE_10907_length_242_cov_0.911243_g10820_i0 PRJNA934332 10907 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 71.6 8.56e-13   NR MBI4765483.1 2026735 g10820 i0 48.4 1.43801652892562 64 33 79.3 0 192 1 78 141 MBI4765483.1 enoyl-CoA hydratase/isomerase family protein [Deltaproteobacteria bacterium] diamond 348 71.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29330219 29330219 PRJNA934332_P_NODE_8289_length_249_cov_0.875000_g8202_i0 PRJNA934332 8289 249 0.875 2.17875 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 58.9 9.42e-9   NR MBI3250099.1 2026735 g8202 i0 48.4 0.771084337349398 64 33 77.1 0 194 3 2 65 MBI3250099.1 nuclear transport factor 2 family protein [Deltaproteobacteria bacterium] diamond 192 58.9 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29487936 29487936 PRJNA934332_P_NODE_7350_length_253_cov_1.283333_g7263_i0 PRJNA934332 7350 253 1.283333 3.24683249 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 56.2 7.48e-7   NR MBM4343160.1 2026735 g7263 i0 59.5 0.49802371541502 42 16 48.6 1 1 123 351 392 MBM4343160.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 126 56.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29772119 29772119 PRJNA934332_P_NODE_5551_length_285_cov_1.188679_g5464_i0 PRJNA934332 5551 285 1.188679 3.38773515 Myxococcota bacterium 2818507 Bacteria Bacteria 63.5 2.45e-9   NR MEM6959678.1 2818507 g5464 i0 27.5 1.91578947368421 91 65 95.8 1 274 2 83 172 MEM6959678.1 AMP-binding protein [Myxococcota bacterium] diamond 546 63.5 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
30088081 30088081 PRJNA934332_P_NODE_3352_length_350_cov_2.162455_g3265_i0 PRJNA934332 3352 350 2.162455 7.5685925 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 56.2 2.4e-6   NR MBI5611060.1 2026735 g3265 i0 34.7 2.43428571428571 98 49 83.1 3 2 292 412 495 MBI5611060.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 852 56.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30285173 30285173 PRJNA934332_P_NODE_2712_length_382_cov_0.860841_g2625_i0 PRJNA934332 2712 382 0.860841 3.28841262 Enhygromyxa 215802 Bacteria Bacteria 52.8 4.88e-5   NR WP_106092241.1 215803 g2625 i0 45 0.942408376963351 60 30 44.8 1 39 209 291 350 WP_106092241.1 DUF4215 domain-containing protein [Enhygromyxa salina] diamond 360 53.1 0.994350282485876 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Enhygromyxa Enhygromyxa salina
30790273 30790273 PRJNA934332_P_NODE_9794_length_245_cov_0.895349_g9707_i0 PRJNA934332 9794 245 0.895349 2.19360505 Bacteria 2 Bacteria Bacteria 110 5.810000000000001e-26   NR HET9959255.1 2268199 g9707 i0 61.7 1.98367346938776 81 27 99.2 1 243 1 282 358 HET9959255.1 hydroxylamine reductase [Polyangiaceae bacterium] diamond 486 110 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
30909785 30909785 PRJNA934332_P_NODE_9354_length_246_cov_0.890173_g9267_i0 PRJNA934332 9354 246 0.890173 2.18982558 Archangium sp. 1872627 Bacteria Bacteria 60.1 2.9e-8   NR MBL8938616.1 1872627 g9267 i0 84.8 0.402439024390244 33 5 40.2 0 92 190 1 33 MBL8938616.1 hypothetical protein [Archangium sp.] diamond 99 60.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium sp.
31162125 31162125 PRJNA934332_P_NODE_6575_length_267_cov_1.587629_g6488_i0 PRJNA934332 6575 267 1.587629 4.23896943 Myxococcales bacterium 2026763 Bacteria Bacteria 65.5 4.85e-10   NR MBL9113283.1 2026763 g6488 i0 50 0.98876404494382 88 44 98.9 0 266 3 37 124 MBL9113283.1 HEAT repeat domain-containing protein [Myxococcales bacterium] diamond 264 65.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
31193636 31193636 PRJNA934332_P_NODE_5775_length_281_cov_1.125000_g5688_i0 PRJNA934332 5775 281 1.125 3.16125 Myxococcota bacterium 2818507 Bacteria Bacteria 59.3 8.42e-8   NR MCK6520332.1 2818507 g5688 i0 47.6 0.672597864768683 63 33 67.3 0 93 281 315 377 MCK6520332.1 carotenoid oxygenase family protein [Myxococcota bacterium] diamond 189 59.3 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
31225487 31225487 PRJNA934332_P_NODE_4255_length_318_cov_2.669388_g4168_i0 PRJNA934332 4255 318 2.669388 8.48865384 Myxococcus sp. AM 1929279 Bacteria Bacteria 47.8 0.00135   NR WP_176434306.1 2745200 g4168 i0 32.6 0.811320754716981 86 52 76.4 2 302 60 206 290 WP_176434306.1 hypothetical protein [Myxococcus sp. AM011] diamond 258 47.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Myxococcus Myxococcus sp. AM011
31257219 31257219 PRJNA934332_P_NODE_10295_length_244_cov_0.900585_g10208_i0 PRJNA934332 10295 244 0.900585 2.1974274 Archangium gephyra 48 Bacteria Bacteria 46.6 0.0017   NR WP_047853793.1 48 g10208 i0 38.7 0.922131147540984 75 43 88.5 1 226 11 549 623 WP_047853793.1 ABC transporter permease/M1 family aminopeptidase [Archangium gephyra] diamond 225 46.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Archangium Archangium gephyra
31288777 31288777 PRJNA934332_P_NODE_9975_length_245_cov_0.883721_g9888_i0 PRJNA934332 9975 245 0.883721 2.16511645 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 94.4 1.69e-22   NR HCV85583.1 2026735 g9888 i0 53.8 0.979591836734694 80 37 98 0 2 241 11 90 HCV85583.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 240 94.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
31731568 31731568 PRJNA934332_P_NODE_5637_length_283_cov_2.371429_g5550_i0 PRJNA934332 5637 283 2.371429 6.71114407 Myxococcales bacterium 2026763 Bacteria Bacteria 62.8 4.53e-9   NR HUJ27140.1 2026763 g5550 i0 35.8 3.0530035335689 95 56 99.6 2 1 282 15 105 HUJ27140.1 phytanoyl-CoA dioxygenase family protein [Myxococcales bacterium] diamond 864 62.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32111381 32111381 PRJNA934332_P_NODE_10338_length_243_cov_1.811765_g10251_i0 PRJNA934332 10338 243 1.811765 4.40258895 Archangiaceae bacterium 2684409 Bacteria Bacteria 150 1.6599999999999999e-40   NR MBM4776178.1 2684409 g10251 i0 100 0.987654320987654 80 0 98.8 0 241 2 463 542 MBM4776178.1 acyl-CoA dehydrogenase [Archangiaceae bacterium] diamond 240 150 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae   Archangiaceae bacterium
32174835 32174835 PRJNA934332_P_NODE_6478_length_269_cov_1.295918_g6391_i0 PRJNA934332 6478 269 1.295918 3.48601942 Polyangiaceae bacterium 2268199 Bacteria Bacteria 56.6 6.74e-7   NR HVU06157.1 2268199 g6391 i0 44.4 0.802973977695167 72 36 80.3 3 3 218 309 376 HVU06157.1 hypothetical protein [Polyangiaceae bacterium] diamond 216 56.6 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
32364622 32364622 PRJNA934332_P_NODE_4279_length_318_cov_1.081633_g4192_i0 PRJNA934332 4279 318 1.081633 3.43959294 Myxococcales bacterium SG8_38 1703407 Bacteria Bacteria 45.1 0.0125   NR KPK14690.1 1703407 g4192 i0 38.9 1.41509433962264 72 38 66 3 96 305 154 221 KPK14690.1 MAG: hypothetical protein AMJ62_12250 [Myxococcales bacterium SG8_38] diamond 450 45.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium SG8_38
32435117 32435117 PRJNA934332_P_NODE_4439_length_313_cov_0.979167_g4352_i0 PRJNA934332 4439 313 0.979167 3.06479271 Bacteria 2 Bacteria Bacteria 123 6.829999999999999e-31   NR WP_146657928.1 215803 g4352 i0 49 8.97124600638978 104 53 99.7 0 1 312 232 335 WP_146657928.1 7-dehydrocholesterol reductase [Enhygromyxa salina] diamond 2808 123 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Enhygromyxa Enhygromyxa salina
32529968 32529968 PRJNA934332_P_NODE_11179_length_241_cov_0.916667_g11092_i0 PRJNA934332 11179 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 77 3.11e-14   NR HIJ67935.1 2026735 g11092 i0 48.1 10.954356846473 79 41 98.3 0 1 237 386 464 HIJ67935.1 response regulator [Deltaproteobacteria bacterium] diamond 2640 77 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32876192 32876192 PRJNA934332_P_NODE_2380_length_403_cov_1.075758_g2293_i0 PRJNA934332 2380 403 1.075758 4.33530474 Bacteria 2 Bacteria Bacteria 85.9 7.35e-17   NR MEM6959678.1 2818507 g2293 i0 41.3 2.49379652605459 104 60 77.4 1 23 334 96 198 MEM6959678.1 AMP-binding protein [Myxococcota bacterium] diamond 1005 85.9 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;