RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA934332" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA934332 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30783260 30783260 PRJNA934332_P_NODE_10954_length_242_cov_0.911243_g10867_i0 PRJNA934332 10954 242 0.911243 2.20520806 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 151 1.78e-43   NR PZM86194.1 2052166 g10867 i0 92.5 0.991735537190083 80 6 99.2 0 3 242 39 118 PZM86194.1 MAG: hypothetical protein DKT66_02015 [Candidatus Melainabacteria bacterium] diamond 240 151 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
31763308 31763308 PRJNA934332_P_NODE_10977_length_242_cov_0.911243_g10890_i0 PRJNA934332 10977 242 0.911243 2.20520806 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 159 3.79e-43   NR MBP6348478.1 2711154 g10890 i0 98.8 1.98347107438017 80 1 99.2 0 1 240 406 485 MBP6348478.1 excinuclease ABC subunit UvrA [Candidatus Obscuribacter sp.] diamond 480 159 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
31833442 31833442 PRJNA934332_P_NODE_10777_length_242_cov_0.911243_g10690_i0 PRJNA934332 10777 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 42.7 0.0341   NR QQR55902.1 2052166 g10690 i0 41.5 1.36363636363636 41 24 50.8 0 238 116 239 279 QQR55902.1 MAG: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Candidatus Melainabacteria bacterium] diamond 330 42.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;