contig_metadata
11 rows where analysis = "diamond", bioproject = "PRJNA934332" and tax_phylum = "Apicomplexa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11114231 | 11114231 | PRJNA934332_P_NODE_1369_length_518_cov_2.006742_g1284_i0 | PRJNA934332 | 1369 | 518 | 2.006742 | 10.39492356 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 196 | 6.059999999999999e-60 | NR | XP_026191360.1 | 88456 | g1284 | i0 | 62.2 | 34.3725868725869 | 156 | 59 | 90.3 | 0 | 51 | 518 | 7 | 162 | XP_026191360.1 40S ribosomal protein S3-3 [Cyclospora cayetanensis] | diamond | 17805 | 196 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Cyclospora | Cyclospora cayetanensis | ||
| 23862957 | 23862957 | PRJNA934332_P_NODE_3599_length_341_cov_1.149254_g3512_i0 | PRJNA934332 | 3599 | 341 | 1.149254 | 3.91895614 | Toxoplasma gondii ME49 | 508771 | SAR_Eukaryotes | SAR_Eukaryotes | 166 | 2.78e-50 | NR | XP_002367420.1 | 508771 | g3512 | i0 | 73.3 | 1.86510263929619 | 105 | 28 | 92.4 | 0 | 325 | 11 | 1 | 105 | XP_002367420.1 translation initiation factor eIF-5A, putative [Toxoplasma gondii ME49] | diamond | 636 | 166 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Sarcocystidae | Toxoplasma | Toxoplasma gondii | ||
| 26708106 | 26708106 | PRJNA934332_P_NODE_4881_length_300_cov_1.546256_g4794_i0 | PRJNA934332 | 4881 | 300 | 1.546256 | 4.638768 | Plasmodium falciparum NF54 | 5843 | SAR_Eukaryotes | SAR_Eukaryotes | 69.7 | 3.05e-13 | NR | EWC88275.1 | 5843 | g4794 | i0 | 100 | 0.36 | 36 | 0 | 36 | 0 | 288 | 181 | 44 | 79 | EWC88275.1 hypothetical protein PFNF54_02881 [Plasmodium falciparum NF54] | diamond | 108 | 69.7 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium falciparum | ||
| 27000153 | 27000153 | PRJNA934332_P_NODE_11242_length_241_cov_0.916667_g11155_i0 | PRJNA934332 | 11242 | 241 | 0.916667 | 2.20916747 | Eucoccidiorida | 75739 | SAR_Eukaryotes | SAR_Eukaryotes | 66.6 | 1.4e-10 | NR | XP_067066932.1 | 117008 | g11155 | i0 | 38.2 | 5.67634854771784 | 76 | 47 | 94.6 | 0 | 234 | 7 | 367 | 442 | XP_067066932.1 PA14 domain-containing protein [Cryptosporidium andersoni] | diamond | 1368 | 66.6 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Cryptosporidiidae | Cryptosporidium | Cryptosporidium andersoni | ||
| 27341202 | 27341202 | PRJNA934332_P_NODE_3683_length_338_cov_1.452830_g3596_i0 | PRJNA934332 | 3683 | 338 | 1.45283 | 4.9105654 | Plasmodium falciparum MaliPS | 5833 | SAR_Eukaryotes | SAR_Eukaryotes | 74.3 | 4.78e-15 | NR | ETW49148.1 | 1036727 | g3596 | i0 | 100 | 0.292899408284024 | 33 | 0 | 29.3 | 0 | 188 | 90 | 32 | 64 | ETW49148.1 hypothetical protein PFMALIP_02850 [Plasmodium falciparum MaliPS096_E11] | diamond | 99 | 74.3 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium falciparum | ||
| 27783293 | 27783293 | PRJNA934332_P_NODE_1164_length_560_cov_1.897331_g1079_i0 | PRJNA934332 | 1164 | 560 | 1.897331 | 10.6250536 | Cyclospora cayetanensis | 88456 | SAR_Eukaryotes | SAR_Eukaryotes | 205 | 1.8e-63 | NR | OEH76901.1 | 88456 | g1079 | i0 | 62.1 | 4.65 | 177 | 67 | 94.8 | 0 | 4 | 534 | 29 | 205 | OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] | diamond | 2604 | 205 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Cyclospora | Cyclospora cayetanensis | ||
| 28983189 | 28983189 | PRJNA934332_P_NODE_7888_length_250_cov_0.870056_g7801_i0 | PRJNA934332 | 7888 | 250 | 0.870056 | 2.17514 | Theileria equi strain WA | 1537102 | SAR_Eukaryotes | SAR_Eukaryotes | 90.9 | 1.19e-20 | NR | XP_004829363.1 | 1537102 | g7801 | i0 | 59.4 | 2.556 | 69 | 28 | 82.8 | 0 | 225 | 19 | 4 | 72 | XP_004829363.1 60S ribosomal protein L17, putative [Theileria equi strain WA] | diamond | 639 | 90.9 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Piroplasmida | Theileriidae | Theileria | Theileria equi | ||
| 29172552 | 29172552 | PRJNA934332_P_NODE_9069_length_247_cov_0.885057_g8982_i0 | PRJNA934332 | 9069 | 247 | 0.885057 | 2.18609079 | Theileria parva strain Muguga | 333668 | SAR_Eukaryotes | SAR_Eukaryotes | 78.6 | 7.6e-15 | NR | XP_061161066.1 | 333668 | g8982 | i0 | 52.4 | 3.98380566801619 | 82 | 38 | 98.4 | 1 | 4 | 246 | 144 | 225 | XP_061161066.1 Obg-like ATPase 1 [Theileria parva strain Muguga] | diamond | 984 | 78.6 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Piroplasmida | Theileriidae | Theileria | Theileria parva | ||
| 32333205 | 32333205 | PRJNA934332_P_NODE_8559_length_248_cov_0.880000_g8472_i0 | PRJNA934332 | 8559 | 248 | 0.88 | 2.1824 | Besnoitia besnoiti | 94643 | SAR_Eukaryotes | SAR_Eukaryotes | 73.2 | 7.62e-13 | NR | XP_029220190.1 | 94643 | g8472 | i0 | 61.5 | 61.875 | 52 | 20 | 62.9 | 0 | 93 | 248 | 531 | 582 | XP_029220190.1 elongation factor Tu GTP binding domain-containing protein [Besnoitia besnoiti] | diamond | 15345 | 73.2 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Sarcocystidae | Besnoitia | Besnoitia besnoiti | ||
| 32364625 | 32364625 | PRJNA934332_P_NODE_8579_length_248_cov_0.880000_g8492_i0 | PRJNA934332 | 8579 | 248 | 0.88 | 2.1824 | Toxoplasma gondii TgCatPRC2 | 1130821 | SAR_Eukaryotes | SAR_Eukaryotes | 58.9 | 7.5e-8 | NR | KYK63584.1 | 1130821 | g8492 | i0 | 43.1 | 3.31451612903226 | 65 | 36 | 77.4 | 1 | 200 | 9 | 33 | 97 | KYK63584.1 brix domain-containing protein [Toxoplasma gondii TgCatPRC2] | diamond | 822 | 58.9 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Sarcocystidae | Toxoplasma | Toxoplasma gondii | ||
| 32806238 | 32806238 | PRJNA934332_P_NODE_11360_length_241_cov_0.916667_g11273_i0 | PRJNA934332 | 11360 | 241 | 0.916667 | 2.20916747 | Plasmodium sp. DRC-Itaito | 720590 | SAR_Eukaryotes | SAR_Eukaryotes | 94 | 8.04e-21 | NR | SPJ09799.1 | 720590 | g11273 | i0 | 49.4 | 2.95020746887967 | 79 | 40 | 98.3 | 0 | 2 | 238 | 48 | 126 | SPJ09799.1 4-nitrophenylphosphatase [Plasmodium sp. DRC-Itaito] | diamond | 711 | 94 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium sp. DRC-Itaito |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;