RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA934332" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA934332 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6013860 6013860 PRJNA934332_P_NODE_545_length_800_cov_2.371389_g473_i0 PRJNA934332 545 800 2.371389 18.971112 Edafosvirus sp. 2487765 Viruses Viruses 338 7.55e-111   NR AYV78014.1 2487765 g473 i0 61 3.01125 267 100 99.4 2 3 797 140 404 AYV78014.1 MAG: elongation factor 1 alpha long form [Edafosvirus sp.] diamond 2409 338 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.
28383000 28383000 PRJNA934332_P_NODE_9926_length_245_cov_0.895349_g9839_i0 PRJNA934332 9926 245 0.895349 2.19360505 Adintovirus bos4377 3115894 Viruses Viruses 62.8 6.64e-10   NR DBA50495.1 3115894 g9839 i0 47.3 1.8 74 39 90.6 0 222 1 2 75 DBA50495.1 MAG TPA_asm: Adenain [Adintovirus bos4377] diamond 441 62.8 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus bos4377
30025154 30025154 PRJNA934332_P_NODE_8911_length_247_cov_1.327586_g8824_i0 PRJNA934332 8911 247 1.327586 3.27913742 Fadolivirus algeromassiliense 3060017 Viruses Viruses 87 7.22e-18   NR YP_010803269.1 3060017 g8824 i0 46.9 0.983805668016194 81 43 98.4 0 1 243 288 368 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 243 87 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;