RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA931595" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA931595 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27625385 27625385 PRJNA931595_P_NODE_10324_length_269_cov_2.326531_g10215_i0 PRJNA931595 10324 269 2.326531 6.25836839 Synergistaceae bacterium 2053624 Bacteria Bacteria 43.1 0.0364   NR MDO5563373.1 2053624 g10215 i0 35.7 0.62453531598513 56 28 61.3 3 82 246 280 328 MDO5563373.1 AbgT family transporter [Synergistaceae bacterium] diamond 168 43.1 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
29368895 29368895 PRJNA931595_P_NODE_9149_length_280_cov_1.434783_g9040_i0 PRJNA931595 9149 280 1.434783 4.0173924 Meiothermus 65551 Bacteria Bacteria 43.1 0.034   NR WP_409654204.1 277 g9040 i0 42.6 2.01428571428571 47 27 50.4 0 176 36 3 49 WP_409654204.1 lysophospholipid acyltransferase family protein [Meiothermus ruber] diamond 564 43.5 0.990804597701149 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus Meiothermus ruber

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;