RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA929952" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929952 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14937102 14937102 PRJNA929952_P_NODE_152_length_2070_cov_4.441940_g97_i0 PRJNA929952 152 2070 4.44194 91.948158 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 363 1.18e-112   NR KAI2799691.1 40697 g97 i0 54.7 52.4565217391304 358 122 46.8 4 1327 359 283 635 KAI2799691.1 Heat shock cognate 71 kDa protein [Blomia tropicalis] diamond 108585 363 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Echimyopodidae Blomia Blomia tropicalis
31573708 31573708 PRJNA929952_P_NODE_23236_length_166_cov_2.072993_g21942_i0 PRJNA929952 23236 166 2.072993 3.44116838 Leptinotarsa decemlineata 7539 Arthropoda Arthropoda 48.1 1.64e-4   NR XP_023015979.1 7539 g21942 i0 57.9 3.32530120481928 38 15 66.9 1 111 1 292 329 XP_023015979.1 uncharacterized protein LOC111505411 [Leptinotarsa decemlineata] diamond 552 48.1 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Coleoptera Chrysomelidae Leptinotarsa Leptinotarsa decemlineata
32308545 32308545 PRJNA929952_P_NODE_5079_length_553_cov_3.791985_g4045_i0 PRJNA929952 5079 553 3.791985 20.96967705 Culicidae 7157 Arthropoda Arthropoda 138 1.0399999999999998e-37   NR XP_053685040.1 53552 g4045 i0 50.4 16.2151898734177 137 62 74.3 1 472 62 33 163 XP_053685040.1 ADP-ribose glycohydrolase OARD1-like [Sabethes cyaneus] diamond 8967 138 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Culicidae Sabethes Sabethes cyaneus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;