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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA929924" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929924 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20380540 20380540 PRJNA929924_P_NODE_15636_length_168_cov_0.873950_g15473_i0 PRJNA929924 15636 168 0.87395 1.468236 Cyclobacteriaceae bacterium 2099675 Bacteria Bacteria 109 3.21e-26   NR HZY80804.1 2099675 g15473 i0 96.4 2 56 2 100 0 1 168 7 62 HZY80804.1 DNA-directed RNA polymerase subunit beta' [Cyclobacteriaceae bacterium] diamond 336 109 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
26930038 26930038 PRJNA929924_P_NODE_17902_length_163_cov_0.912281_g17739_i0 PRJNA929924 17902 163 0.912281 1.48701803 Terrimonas sp. 1914338 Bacteria Bacteria 94.7 5.9e-21   NR WP_116874309.1 1914338 g17739 i0 100 1.91411042944785 52 0 95.7 0 3 158 335 386 WP_116874309.1 efflux RND transporter permease subunit [Terrimonas sp.] diamond 312 94.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Terrimonas Terrimonas sp.
28793320 28793320 PRJNA929924_P_NODE_17127_length_164_cov_0.904348_g16964_i0 PRJNA929924 17127 164 0.904348 1.48313072 Ferruginibacter sp. 1940288 Bacteria Bacteria 94.4 8.42e-21   NR MBL7702677.1 1940288 g16964 i0 74.1 2.96341463414634 54 14 98.8 0 2 163 780 833 MBL7702677.1 SusC/RagA family TonB-linked outer membrane protein [Ferruginibacter sp.] diamond 486 94.4 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Ferruginibacter Ferruginibacter sp.
29077760 29077760 PRJNA929924_P_NODE_17588_length_163_cov_0.912281_g17425_i0 PRJNA929924 17588 163 0.912281 1.48701803 Agriterribacter sp. 2821509 Bacteria Bacteria 74.7 6.46e-14   NR MFT3701858.1 2821509 g17425 i0 89.2 0.680981595092024 37 4 68.1 0 51 161 227 263 MFT3701858.1 TonB-dependent receptor [Agriterribacter sp.] diamond 111 74.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Agriterribacter Agriterribacter sp.
29204114 29204114 PRJNA929924_P_NODE_15849_length_167_cov_0.881356_g15686_i0 PRJNA929924 15849 167 0.881356 1.47186452 Cyclobacteriaceae bacterium 2099675 Bacteria Bacteria 104 2.6699999999999998e-24   NR HMJ69558.1 2099675 g15686 i0 90.9 4.94011976047904 55 5 98.8 0 2 166 49 103 HMJ69558.1 Rne/Rng family ribonuclease [Cyclobacteriaceae bacterium] diamond 825 104 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
29431723 29431723 PRJNA929924_P_NODE_18049_length_162_cov_0.920354_g17886_i0 PRJNA929924 18049 162 0.920354 1.49097348 Cytophagales 768507 Bacteria Bacteria 90.1 5.3e-21   NR MDH4460711.1 50419 g17886 i0 97.8 11.6666666666667 45 1 83.3 0 135 1 1 45 MDH4460711.1 30S ribosomal protein S16 [Flectobacillus sp.] diamond 1890 90.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flectobacillaceae Flectobacillus Flectobacillus sp.
29810766 29810766 PRJNA929924_P_NODE_15551_length_168_cov_0.873950_g15388_i0 PRJNA929924 15551 168 0.87395 1.468236 Cytophagales 768507 Bacteria Bacteria 105 7.72e-25   NR WP_305953286.1 312279 g15388 i0 90.9 3.92857142857143 55 5 98.2 0 166 2 738 792 WP_305953286.1 TonB-dependent receptor [Emticicia oligotrophica] diamond 660 106 0.990566037735849 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Leadbetterellaceae Emticicia Emticicia oligotrophica
30056410 30056410 PRJNA929924_P_NODE_17891_length_163_cov_0.912281_g17728_i0 PRJNA929924 17891 163 0.912281 1.48701803 Chitinophagales bacterium 2448779 Bacteria Bacteria 107 3.36e-26   NR MBN8671110.1 2448779 g17728 i0 90.7 0.993865030674847 54 5 99.4 0 162 1 215 268 MBN8671110.1 FAD-binding oxidoreductase [Chitinophagales bacterium] diamond 162 107 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales     Chitinophagales bacterium
30182892 30182892 PRJNA929924_P_NODE_16512_length_166_cov_0.888889_g16349_i0 PRJNA929924 16512 166 0.888889 1.47555574 Bacteroidota bacterium 1898104 Bacteria Bacteria 109 3.45e-26   NR MES2627940.1 1898104 g16349 i0 96.3 1.96987951807229 54 2 97.6 0 166 5 408 461 MES2627940.1 peptide chain release factor 3 [Bacteroidota bacterium] diamond 327 109 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
30625132 30625132 PRJNA929924_P_NODE_15453_length_168_cov_0.873950_g15290_i0 PRJNA929924 15453 168 0.87395 1.468236 Flavobacteriia bacterium 2044941 Bacteria Bacteria 116 7.8e-29   NR MBH1960069.1 2044941 g15290 i0 94.6 1 56 3 100 0 168 1 462 517 MBH1960069.1 calcineurin-like phosphoesterase C-terminal domain-containing protein [Flavobacteriia bacterium] diamond 168 116 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia       Flavobacteriia bacterium
31352188 31352188 PRJNA929924_P_NODE_15056_length_169_cov_0.866667_g14893_i0 PRJNA929924 15056 169 0.866667 1.46466723 Ginsengibacter sp. 2806034 Bacteria Bacteria 76.6 1.45e-14   NR MEO6814235.1 2806034 g14893 i0 68.4 3.0887573964497 57 17 99.4 1 168 1 156 212 MEO6814235.1 T9SS type A sorting domain-containing protein [Ginsengibacter sp.] diamond 522 76.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Ginsengibacter Ginsengibacter sp.
31447047 31447047 PRJNA929924_P_NODE_16936_length_165_cov_0.896552_g16773_i0 PRJNA929924 16936 165 0.896552 1.4793108 Cyclobacteriaceae bacterium 2099675 Bacteria Bacteria 101 2.9199999999999998e-24   NR HMJ71228.1 2099675 g16773 i0 85.5 1.98181818181818 55 8 100 0 165 1 195 249 HMJ71228.1 transporter [Cyclobacteriaceae bacterium] diamond 327 101 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cyclobacteriaceae   Cyclobacteriaceae bacterium
32491176 32491176 PRJNA929924_P_NODE_17159_length_164_cov_0.904348_g16996_i0 PRJNA929924 17159 164 0.904348 1.48313072 Agriterribacter sp. 2821509 Bacteria Bacteria 70.5 5.9e-13   NR MFT3704183.1 2821509 g16996 i0 78.9 1.04268292682927 57 7 98.8 2 162 1 73 127 MFT3704183.1 hypothetical protein [Agriterribacter sp.] diamond 171 70.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Agriterribacter Agriterribacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;