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contig_metadata

30 rows where analysis = "diamond", bioproject = "PRJNA929922" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 30 ✖

bioproject 1

  • PRJNA929922 · 30 ✖

analysis 1

  • diamond · 30 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12733443 12733443 PRJNA929922_S_NODE_50_length_2447_cov_66.820135_g16_i0 PRJNA929922 50 2447 66.820135 1635.08870345 Moloney murine leukemia virus 11801 Viruses Viruses 1295 0   NR NP_057933.2 11801 g16 i0 97.6 2.42378422558235 659 16 80.8 0 2305 329 677 1335 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 5931 1295 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
21307573 21307573 PRJNA929922_P_NODE_107577_length_251_cov_0.865169_g107037_i0 PRJNA929922 107577 251 0.865169 2.17157419 Caudoviricetes sp. 2832643 Viruses Viruses 65.9 1.14e-11   NR DAY60164.1 2832643 g107037 i0 53.8 0.776892430278884 65 30 77.7 0 4 198 45 109 DAY60164.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 195 65.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
26835183 26835183 PRJNA929922_S_NODE_45801_length_277_cov_4.205882_g45577_i0 PRJNA929922 45801 277 4.205882 11.65029314 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 121 1.09e-29   NR WKU61618.1 3063761 g45577 i0 87 0.747292418772563 69 9 74.7 0 207 1 1662 1730 WKU61618.1 polyprotein [Zebrafish picornavirus 2] diamond 207 121 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
26866918 26866918 PRJNA929922_P_NODE_37041_length_353_cov_1.650000_g36501_i0 PRJNA929922 37041 353 1.65 5.8245 Bacteriophage sp. 38018 Viruses Viruses 116 9.52e-28   NR AXH77611.1 38018 g36501 i0 47 0.977337110481586 115 59 96 1 13 351 107 221 AXH77611.1 MAG: tail tube protein [Bacteriophage sp.] diamond 345 116 1 Viruses               Bacteriophage sp.
27000144 27000144 PRJNA929922_P_NODE_70982_length_290_cov_1.202765_g70442_i0 PRJNA929922 70982 290 1.202765 3.4880185 root 1 Root_unresolved Root_unresolved 43.1 0.0422   NR AKN05841.1 11676 g70442 i0 44.7 1.42758620689655 38 20 39.3 1 148 35 158 194 AKN05841.1 gag protein, partial [Human immunodeficiency virus 1] diamond 414 43.5 0.990804597701149 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Lentivirus Lentivirus humimdef1
27436008 27436008 PRJNA929922_S_NODE_62483_length_249_cov_1.750000_g62259_i0 PRJNA929922 62483 249 1.75 4.3575 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 64.3 1.06e-9   NR AVM87439.1 3063761 g62259 i0 54.9 0.614457831325301 51 23 61.4 0 91 243 928 978 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 153 64.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
27561805 27561805 PRJNA929922_P_NODE_141984_length_245_cov_0.895349_g141444_i0 PRJNA929922 141984 245 0.895349 2.19360505 Hangzhou zicrona caerulea xinmovirus 1 2905557 Viruses Viruses 108 2.69e-25   NR UHK03222.1 2905557 g141444 i0 73.1 0.820408163265306 67 18 82 0 3 203 838 904 UHK03222.1 MAG: RNA-dependent RNA polymerase [Hangzhou zicrona caerulea xinmovirus 1] diamond 201 108 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Xinmoviridae Corulvirus Corulvirus hangzhouense
27783238 27783238 PRJNA929922_P_NODE_165944_length_231_cov_2.886076_g165404_i0 PRJNA929922 165944 231 2.886076 6.66683556 Moloney murine leukemia virus 11801 Viruses Viruses 123 1.6e-30   NR NP_057933.2 11801 g165404 i0 100 0.805194805194805 62 0 80.5 0 230 45 1274 1335 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 186 123 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
27846107 27846107 PRJNA929922_S_NODE_46144_length_277_cov_1.504902_g45920_i0 PRJNA929922 46144 277 1.504902 4.16857854 Canine parainfluenza virus 149595 Viruses Viruses 92.4 1.76e-19   NR ABP88109.1 149595 g45920 i0 67.1 0.855595667870036 79 26 85.6 0 3 239 471 549 ABP88109.1 fusion protein [Canine parainfluenza virus] diamond 237 92.4 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus
28351381 28351381 PRJNA929922_S_NODE_41326_length_287_cov_0.957944_g41102_i0 PRJNA929922 41326 287 0.957944 2.74929928 Phage sp. ctgku9 2828123 Viruses Viruses 52.8 1.81e-5   NR DAJ19260.1 2828123 g41102 i0 37.8 0.857142857142857 82 51 85.7 0 281 36 130 211 DAJ19260.1 MAG TPA: hypothetical protein [Phage sp. ctgku9] diamond 246 52.8 1 Viruses               Phage sp. ctgku9
29361822 29361822 PRJNA929922_P_NODE_58249_length_309_cov_1.474576_g57709_i0 PRJNA929922 58249 309 1.474576 4.55643984 Escherichia Stx1 converting phage 194948 Viruses Viruses 56.6 6.37e-8   NR NP_859240.1 194948 g57709 i0 66.7 0.436893203883495 45 15 43.7 0 130 264 9 53 NP_859240.1 hypothetical protein Stx1_p161 [Escherichia Stx1 converting phage] diamond 135 56.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Traversvirus Escherichia Stx1 converting phage
29393476 29393476 PRJNA929922_S_NODE_48549_length_272_cov_2.241206_g48325_i0 PRJNA929922 48549 272 2.241206 6.09608032 Erythrocytic necrosis virus 1543320 Viruses Viruses 48.1 2e-4   NR QCF47477.1 1543320 g48325 i0 59.1 0.485294117647059 44 16 46.3 1 69 194 21 64 QCF47477.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 132 48.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
29582467 29582467 PRJNA929922_S_NODE_70830_length_237_cov_2.859756_g70606_i0 PRJNA929922 70830 237 2.859756 6.77762172 Escherichia phage Copypasta 3096133 Viruses Viruses 40.8 0.0195   NR WPH57058.1 3096133 g70606 i0 59 0.493670886075949 39 16 49.4 0 144 28 18 56 WPH57058.1 hypothetical protein Copypasta_CDS0011 [Escherichia phage Copypasta] diamond 117 40.8 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Escherichia phage Copypasta
29645527 29645527 PRJNA929922_S_NODE_35390_length_300_cov_1.792952_g35166_i0 PRJNA929922 35390 300 1.792952 5.378856 Caudoviricetes sp. 2832643 Viruses Viruses 94.4 1.49e-22   NR DAH93386.1 2832643 g35166 i0 58.7 0.75 75 31 75 0 264 40 1 75 DAH93386.1 MAG TPA: hypothetical protein, partial [Caudoviricetes sp.] diamond 225 94.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30158144 30158144 PRJNA929922_P_NODE_33512_length_363_cov_2.800000_g32972_i0 PRJNA929922 33512 363 2.8 10.164 Gammaretrovirus 153135 Viruses Viruses 251 9.77e-75   NR ARB03489.1 11786 g32972 i0 97.5 10.9090909090909 120 3 99.2 0 361 2 781 900 ARB03489.1 putative gag-pro-pol polyprotein [Murine leukemia virus] diamond 3960 253 0.992094861660079 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
30182869 30182869 PRJNA929922_P_NODE_2352_length_914_cov_1.381688_g1928_i0 PRJNA929922 2352 914 1.381688 12.62862832 Bacteriophage sp. 38018 Viruses Viruses 543 6.65e-191   NR AXH77615.1 38018 g1928 i0 85.9 0.99781181619256 304 43 99.8 0 912 1 18 321 AXH77615.1 MAG: replication initiation factor [Bacteriophage sp.] diamond 912 543 1 Viruses               Bacteriophage sp.
30246285 30246285 PRJNA929922_P_NODE_111072_length_250_cov_1.305085_g110532_i0 PRJNA929922 111072 250 1.305085 3.2627125 Bacteriophage sp. 38018 Viruses Viruses 119 1.83e-32   NR AXH77614.1 38018 g110532 i0 62.2 0.984 82 31 98.4 0 3 248 41 122 AXH77614.1 MAG: hypothetical protein [Bacteriophage sp.] diamond 246 119 1 Viruses               Bacteriophage sp.
30246311 30246311 PRJNA929922_P_NODE_7672_length_571_cov_1.166667_g7149_i0 PRJNA929922 7672 571 1.166667 6.66166857 Caudoviricetes sp. 2832643 Viruses Viruses 60.5 4.97e-9   NR DAG47549.1 2832643 g7149 i0 74.2 0.330998248686515 31 8 16.3 0 322 230 1 31 DAG47549.1 MAG TPA: Defensin-like protein-Tasting Protein, PLANT PROTEIN.8A [Caudoviricetes sp.] diamond 189 60.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30278058 30278058 PRJNA929922_S_NODE_13212_length_396_cov_1.780186_g12988_i0 PRJNA929922 13212 396 1.780186 7.04953656 Escherichia Stx1 converting phage 194948 Viruses Viruses 61.2 2.16e-9   NR NP_859183.1 194948 g12988 i0 43.9 0.5 66 37 50 0 395 198 22 87 NP_859183.1 hypothetical protein Stx1_p105 [Escherichia Stx1 converting phage] diamond 198 61.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Traversvirus Escherichia Stx1 converting phage
30309752 30309752 PRJNA929922_P_NODE_100572_length_256_cov_1.519126_g100032_i0 PRJNA929922 100572 256 1.519126 3.88896256 Bombus cryptarum densovirus 2094261 Viruses Viruses 48.1 5.54e-4   NR YP_009552710.1 2094261 g100032 i0 45.3 1.5 64 29 68 1 11 184 62 125 YP_009552710.1 putative VP1 [Bombus cryptarum densovirus] diamond 384 48.1 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Bombus cryptarum densovirus
30316882 30316882 PRJNA929922_P_NODE_36572_length_354_cov_2.295374_g36032_i0 PRJNA929922 36572 354 2.295374 8.12562396 Gammaretrovirus 153135 Viruses Viruses 220 8.720000000000001e-64   NR NP_040333.1 11795 g36032 i0 94.6 4.74576271186441 112 6 94.9 0 354 19 529 640 NP_040333.1 RNA-dependent DNA polymerase, partial [Friend murine leukemia virus] diamond 1680 222 0.990990990990991 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
30467595 30467595 PRJNA929922_S_NODE_45593_length_278_cov_1.502439_g45369_i0 PRJNA929922 45593 278 1.502439 4.17678042 uncultured Caudovirales phage 2100421 Viruses Viruses 110 5.68e-26   NR CAB5155471.1 2100421 g45369 i0 62.1 0.938848920863309 87 28 93.9 1 276 16 368 449 CAB5155471.1 LT_GEWL domain containing protein [uncultured Caudovirales phage] diamond 261 110 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
30941407 30941407 PRJNA929922_S_NODE_11854_length_408_cov_2.080597_g11630_i0 PRJNA929922 11854 408 2.080597 8.48883576 Caudoviricetes sp. 2832643 Viruses Viruses 64.3 1.08e-10   NR DAI56203.1 2832643 g11630 i0 66.7 0.698529411764706 48 16 35.3 0 198 55 24 71 DAI56203.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 285 64.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31130465 31130465 PRJNA929922_P_NODE_28635_length_380_cov_2.973941_g28095_i0 PRJNA929922 28635 380 2.973941 11.3009758 Gammaretrovirus murleu 3428959 Viruses Viruses 258 1.1e-81   NR 8WUS_E 11801 g28095 i0 99.2 3.97894736842105 126 1 99.5 0 379 2 251 376 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 1512 258 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31232445 31232445 PRJNA929922_P_NODE_122455_length_248_cov_0.880000_g121915_i0 PRJNA929922 122455 248 0.88 2.1824 root 1 Root_unresolved Root_unresolved 49.7 1.41e-4   NR NP_612577.1 10640 g121915 i0 43.5 2.17741935483871 46 26 55.6 0 11 148 585 630 NP_612577.1 Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease; Reverse transcriptase] [Carnation etched ring virus] diamond 540 49.7 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Caulimovirus Caulimovirus incidianthi
31257164 31257164 PRJNA929922_P_NODE_149095_length_243_cov_1.311765_g148555_i0 PRJNA929922 149095 243 1.311765 3.18758895 Dioscorea nummularia-associated virus 2303485 Viruses Viruses 102 2.85e-23   NR YP_009553219.1 2303485 g148555 i0 66.7 0.962962962962963 78 25 95.1 1 243 13 1336 1413 YP_009553219.1 ORF3 [Dioscorea nummularia-associated virus] diamond 234 102 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Caulimoviridae Dioscovirus Dioscovirus dioscoreae
31636702 31636702 PRJNA929922_P_NODE_83836_length_275_cov_0.702970_g83296_i0 PRJNA929922 83836 275 0.70297 1.9331675 Pandoravirus quercus 2107709 Viruses Viruses 45.1 0.00836   NR YP_009482846.1 2107709 g83296 i0 40 0.6 55 30 57.8 2 231 73 32 85 YP_009482846.1 hypothetical protein pqer_cds_155 [Pandoravirus quercus] diamond 165 45.1 1 Viruses             Pandoravirus Pandoravirus quercus
31826356 31826356 PRJNA929922_P_NODE_114557_length_250_cov_0.870056_g114017_i0 PRJNA929922 114557 250 0.870056 2.17514 Caudoviricetes sp. 2832643 Viruses Viruses 57 8.22e-9   NR DAE84060.1 2832643 g114017 i0 77.1 0.42 35 8 42 0 2 106 15 49 DAE84060.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 105 57 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31984671 31984671 PRJNA929922_P_NODE_96898_length_260_cov_1.347594_g96358_i0 PRJNA929922 96898 260 1.347594 3.5037444 Caudoviricetes sp. 2832643 Viruses Viruses 41.2 0.0415   NR DAK95083.1 2832643 g96358 i0 38.3 0.542307692307692 47 26 50.8 2 199 68 31 77 DAK95083.1 MAG TPA: hypothetical protein [Caudoviricetes sp.] diamond 141 41.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32435106 32435106 PRJNA929922_S_NODE_38719_length_292_cov_1.922374_g38495_i0 PRJNA929922 38719 292 1.922374 5.61333208 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 67.4 1.46e-10   NR WZI33513.1 3063761 g38495 i0 41.1 3.97602739726027 95 48 92.5 2 284 15 885 976 WZI33513.1 MAG: polyprotein, partial [Crohivirus A] diamond 1161 67.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Crohivirus Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;