RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA929922" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA929922 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27561805 27561805 PRJNA929922_P_NODE_141984_length_245_cov_0.895349_g141444_i0 PRJNA929922 141984 245 0.895349 2.19360505 Hangzhou zicrona caerulea xinmovirus 1 2905557 Viruses Viruses 108 2.69e-25   NR UHK03222.1 2905557 g141444 i0 73.1 0.820408163265306 67 18 82 0 3 203 838 904 UHK03222.1 MAG: RNA-dependent RNA polymerase [Hangzhou zicrona caerulea xinmovirus 1] diamond 201 108 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Xinmoviridae Corulvirus Corulvirus hangzhouense
27846107 27846107 PRJNA929922_S_NODE_46144_length_277_cov_1.504902_g45920_i0 PRJNA929922 46144 277 1.504902 4.16857854 Canine parainfluenza virus 149595 Viruses Viruses 92.4 1.76e-19   NR ABP88109.1 149595 g45920 i0 67.1 0.855595667870036 79 26 85.6 0 3 239 471 549 ABP88109.1 fusion protein [Canine parainfluenza virus] diamond 237 92.4 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;