RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA929922" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA929922 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27821929 27821929 PRJNA929922_P_NODE_73964_length_286_cov_1.446009_g73424_i0 PRJNA929922 73964 286 1.446009 4.13558574 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 95.9 1.39e-20   NR CAH1776006.1 6347 g73424 i0 51.8 2.65384615384615 85 37 85 1 1 243 3277 3361 CAH1776006.1 unnamed protein product [Owenia fusiformis] diamond 759 96.3 0.995846313603323 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
28295242 28295242 PRJNA929922_P_NODE_65466_length_298_cov_1.026667_g64926_i0 PRJNA929922 65466 298 1.026667 3.05946766 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 50.8 1.04e-4   NR CAH1778976.1 6347 g64926 i0 50 1.32885906040268 42 17 42.3 1 141 16 308 345 CAH1778976.1 unnamed protein product [Owenia fusiformis] diamond 396 50.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis
31858049 31858049 PRJNA929922_P_NODE_106617_length_251_cov_0.865169_g106077_i0 PRJNA929922 106617 251 0.865169 2.17157419 Capitella teleta 283909 Annelida Annelida 67.4 7.9e-12   NR ELU02025.1 283909 g106077 i0 48.4 1.52988047808765 64 33 76.5 0 25 216 89 152 ELU02025.1 hypothetical protein CAPTEDRAFT_91793 [Capitella teleta] diamond 384 67.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;