RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA929922" and tax_clade = "Nitrospinota/Tectimicrobiota group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 3 ✖

bioproject 1

  • PRJNA929922 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29835319 29835319 PRJNA929922_P_NODE_146131_length_244_cov_0.900585_g145591_i0 PRJNA929922 146131 244 0.900585 2.1974274 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 149 1.48e-39   NR MDE0206469.1 2528274 g145591 i0 90 4.91803278688525 80 8 98.4 0 3 242 410 489 MDE0206469.1 DNA polymerase III subunit alpha [Candidatus Tectimicrobiota bacterium] diamond 1200 149 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
32554589 32554589 PRJNA929922_P_NODE_134939_length_246_cov_0.890173_g134399_i0 PRJNA929922 134939 246 0.890173 2.18982558 Candidatus Entotheonella factor 1429438 Bacteria Bacteria 76.6 4.56e-14   NR ETW94867.1 1429438 g134399 i0 46.8 0.963414634146341 79 42 96.3 0 237 1 186 264 ETW94867.1 MAG: hypothetical protein ETSY1_33025 [Candidatus Entotheonella factor] diamond 237 76.6 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella Candidatus Entotheonella factor
32844724 32844724 PRJNA929922_P_NODE_107620_length_251_cov_0.865169_g107080_i0 PRJNA929922 107620 251 0.865169 2.17157419 Bacteria 2 Bacteria Bacteria 128 3.46e-36   NR WP_089943880.1 93172 g107080 i0 74.7 1.88844621513944 79 20 94.4 0 238 2 1 79 WP_089943880.1 type II toxin-antitoxin system VapC family toxin [Candidatus Entotheonella palauensis] diamond 474 128 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella Candidatus Entotheonella palauensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;