RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA929522" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 3 ✖

bioproject 1

  • PRJNA929522 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26835141 26835141 PRJNA929522_S_NODE_8661_length_250_cov_0.870056_g8591_i0 PRJNA929522 8661 250 0.870056 2.17514 Mamestra configurata nucleopolyhedrovirus A 207830 Viruses Viruses 42.7 0.0421   NR NP_613176.1 207830 g8591 i0 45.9 0.444 37 20 44.4 0 11 121 88 124 NP_613176.1 helicase [Mamestra configurata nucleopolyhedrovirus A] diamond 111 42.7 1 Viruses       Naldaviricetes Lefavirales Baculoviridae Alphabaculovirus Alphabaculovirus maconfiguratae
27720362 27720362 PRJNA929522_S_NODE_4564_length_321_cov_1.612903_g4494_i0 PRJNA929522 4564 321 1.612903 5.17741863 Mimivirus LCMiAC 2506608 Viruses Viruses 145 1.28e-39   NR QBK88431.1 2506608 g4494 i0 60.4 6.88785046728972 106 42 99.1 0 2 319 232 337 QBK88431.1 MAG: GDP-mannose 4,6 dehydratase [Mimivirus LCMiAC01] diamond 2211 145 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Mimivirus LCMiAC01
30498847 30498847 PRJNA929522_S_NODE_3313_length_368_cov_3.227119_g3243_i0 PRJNA929522 3313 368 3.227119 11.87579792 Caudoviricetes sp. 2832643 Viruses Viruses 65.5 5.52e-10   NR DAV07919.1 2832643 g3243 i0 41.2 0.831521739130435 102 55 83.2 2 38 343 128 224 DAV07919.1 MAG TPA: lytic transglycosylase [Caudoviricetes sp.] diamond 306 65.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;