RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA929522" and tax_phylum = "Candidatus Methanomethylicota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methanomethylicota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA929522 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30783173 30783173 PRJNA929522_S_NODE_5054_length_309_cov_1.474576_g4984_i0 PRJNA929522 5054 309 1.474576 4.55643984 Candidatus Methanomethylicota archaeon 2056631 Archaea Archaea 48.5 6.71e-4   NR RLE48333.1 2250257 g4984 i0 39.7 0.611650485436893 63 37 61.2 1 247 59 105 166 RLE48333.1 MAG: hypothetical protein DRJ31_07460 [Candidatus Methanomethylicota archaeon] diamond 189 48.5 1 Archaea   Thermoproteati Candidatus Methanomethylicota         Candidatus Methanomethylicota archaeon
32876176 32876176 PRJNA929522_S_NODE_3220_length_373_cov_6.800000_g3150_i0 PRJNA929522 3220 373 6.8 25.364 Archaea 2157 Archaea Archaea 45.8 0.00218   NR MBM5805508.1 2250257 g3150 i0 55.6 2.96782841823056 45 20 36.2 0 308 174 1 45 MBM5805508.1 50S ribosomal protein P1 [Candidatus Methanomethylicota archaeon] diamond 1107 45.8 1 Archaea   Thermoproteati Candidatus Methanomethylicota         Candidatus Methanomethylicota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;