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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA929522" and tax_phylum = "Actinomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Actinomycetota · 31 ✖

tax_kingdom 1

bioproject 1

  • PRJNA929522 · 31 ✖

analysis 1

  • diamond · 31 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7283436 7283436 PRJNA929522_S_NODE_5326_length_303_cov_1.004348_g5256_i0 PRJNA929522 5326 303 1.004348 3.04317444 Mycobacterium sp. KBS 1785 Bacteria Bacteria 126 9.049999999999999e-35   NR WP_138886784.1 2578109 g5256 i0 70.8 2.6831683168316798 89 26 88.1 0 302 36 66 154 WP_138886784.1 RidA family protein [Mycobacterium sp. KBS0706] diamond 813 126 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp. KBS0706
9833207 9833207 PRJNA929522_S_NODE_2528_length_420_cov_1.371758_g2458_i0 PRJNA929522 2528 420 1.371758 5.7613836 Marmoricola sp. 1909296 Bacteria Bacteria 110 3.5400000000000003e-26   NR MET0998238.1 1909296 g2458 i0 43.5 5.39285714285714 124 69 88.6 1 6 377 171 293 MET0998238.1 Dyp-type peroxidase [Marmoricola sp.] diamond 2265 110 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae Marmoricola Marmoricola sp.
18756887 18756887 PRJNA929522_S_NODE_5935_length_290_cov_1.516129_g5865_i0 PRJNA929522 5935 290 1.516129 4.3967741 Rubrobacter 42255 Bacteria Bacteria 82.4 7.12e-16   NR WP_219975721.1 49319 g5865 i0 63.3 6.07241379310345 60 22 62.1 0 10 189 465 524 WP_219975721.1 acyl-CoA carboxylase subunit beta [Rubrobacter xylanophilus] diamond 1761 83.2 0.990384615384615 Bacteria   Bacillati Actinomycetota Rubrobacteria Rubrobacterales Rubrobacteraceae Rubrobacter Rubrobacter xylanophilus
23857717 23857717 PRJNA929522_S_NODE_6619_length_278_cov_1.473171_g6549_i0 PRJNA929522 6619 278 1.473171 4.09541538 Propionibacteriaceae bacterium 2021380 Bacteria Bacteria 147 3.9699999999999996e-43   NR MCP3885490.1 2021380 g6549 i0 77.9 0.928057553956835 86 19 92.8 0 260 3 3 88 MCP3885490.1 translation initiation factor IF-5A [Propionibacteriaceae bacterium] diamond 258 147 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Propionibacteriaceae   Propionibacteriaceae bacterium
26613170 26613170 PRJNA929522_S_NODE_2241_length_444_cov_1.700809_g2171_i0 PRJNA929522 2241 444 1.700809 7.55159196 Kutzneria sp. 1930788 Bacteria Bacteria 93.2 2.3e-19   NR MBV8931476.1 1930788 g2171 i0 38.6 1.12162162162162 166 78 96.6 7 435 7 51 215 MBV8931476.1 peptidase [Kutzneria sp.] diamond 498 93.2 1 Bacteria   Bacillati Actinomycetota Actinomycetes Pseudonocardiales Pseudonocardiaceae Kutzneria Kutzneria sp.
27088195 27088195 PRJNA929522_S_NODE_1122_length_606_cov_4.307692_g1057_i0 PRJNA929522 1122 606 4.307692 26.10461352 Agrococcus sp. SGAir 1872417 Bacteria Bacteria 111 1.36e-25   NR WP_137755979.1 2070347 g1057 i0 34.9 1.87623762376238 192 119 93.1 4 600 37 121 310 WP_137755979.1 trypsin-like serine peptidase [Agrococcus sp. SGAir0287] diamond 1137 111 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Agrococcus Agrococcus sp. SGAir0287
27435960 27435960 PRJNA929522_S_NODE_3703_length_350_cov_3.205776_g3633_i0 PRJNA929522 3703 350 3.205776 11.220216 Mycobacterium sp. 1785 Bacteria Bacteria 43.1 0.0405   NR HEY5149072.1 1785 g3633 i0 47.9 0.411428571428571 48 23 41.1 1 282 139 61 106 HEY5149072.1 META domain-containing protein [Mycobacterium sp.] diamond 144 43.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycobacterium Mycobacterium sp.
27467416 27467416 PRJNA929522_S_NODE_4903_length_313_cov_0.962500_g4833_i0 PRJNA929522 4903 313 0.9625 3.012625 unclassified Streptomyces 2593676 Bacteria Bacteria 43.5 0.0465   NR WP_169091874.1 2593676 g4833 i0 40.8 0.680511182108626 71 39 65.2 2 289 86 150 220 WP_169091874.1 MULTISPECIES: type 2 lanthipeptide synthetase LanM family protein [unclassified Streptomyces] diamond 213 43.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces  
27530434 27530434 PRJNA929522_S_NODE_4223_length_333_cov_0.942308_g4153_i0 PRJNA929522 4223 333 0.942308 3.13788564 Mumia sp. zg.B17 2855446 Bacteria Bacteria 44.3 0.0285   NR WP_374106994.1 2855446 g4153 i0 37.3 0.603603603603604 67 41 59.5 1 136 333 212 278 WP_374106994.1 MFS transporter [Mumia sp. zg.B17] diamond 201 44.3 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae Mumia Mumia sp. zg.B17
27600892 27600892 PRJNA929522_S_NODE_9644_length_244_cov_0.900585_g9574_i0 PRJNA929522 9644 244 0.900585 2.1974274 Actinomycetes 1760 Bacteria Bacteria 55.5 1.19e-6   NR HEX2355630.1 1873464 g9574 i0 51 3.70081967213115 51 24 62.7 1 243 91 153 202 HEX2355630.1 serine hydrolase domain-containing protein [Micromonosporaceae bacterium] diamond 903 55.5 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micromonosporales Micromonosporaceae   Micromonosporaceae bacterium
27853220 27853220 PRJNA929522_S_NODE_3724_length_349_cov_2.286232_g3654_i0 PRJNA929522 3724 349 2.286232 7.97894968 Micromonosporaceae 28056 Bacteria Bacteria 55.1 6.24e-6   NR WP_089253998.1 560556 g3654 i0 33.3 2.53581661891117 99 61 85.1 1 53 349 58 151 WP_089253998.1 carboxypeptidase regulatory-like domain-containing protein [Asanoa hainanensis] diamond 885 55.5 0.992792792792793 Bacteria   Bacillati Actinomycetota Actinomycetes Micromonosporales Micromonosporaceae Asanoa Asanoa hainanensis
28477703 28477703 PRJNA929522_S_NODE_4186_length_334_cov_1.126437_g4116_i0 PRJNA929522 4186 334 1.126437 3.76229958 Mycolicibacterium sp. F2 2320850 Bacteria Bacteria 107 3.43e-25   NR WP_247058403.1 2926422 g4116 i0 46.7 2.19161676646707 122 53 99.7 4 333 1 146 266 WP_247058403.1 cellulase family glycosylhydrolase [Mycolicibacterium sp. F2034L] diamond 732 107 1 Bacteria   Bacillati Actinomycetota Actinomycetes Mycobacteriales Mycobacteriaceae Mycolicibacterium Mycolicibacterium sp. F2034L
29172460 29172460 PRJNA929522_S_NODE_5709_length_295_cov_1.040541_g5639_i0 PRJNA929522 5709 295 1.040541 3.06959595 Actinomycetota bacterium 2900548 Bacteria Bacteria 129 3.11e-35   NR MEY3407044.1 2900548 g5639 i0 64.8 0.925423728813559 91 32 92.5 0 293 21 29 119 MEY3407044.1 hypothetical protein [Actinomycetota bacterium] diamond 273 129 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
29204065 29204065 PRJNA929522_S_NODE_9769_length_243_cov_0.905882_g9699_i0 PRJNA929522 9769 243 0.905882 2.20129326 Streptosporangiaceae bacterium 2339230 Bacteria Bacteria 42.7 0.0356   NR HUJ05596.1 2339230 g9699 i0 41.3 0.777777777777778 63 30 70.4 2 173 3 325 386 HUJ05596.1 mycofactocin radical SAM maturase [Streptosporangiaceae bacterium] diamond 189 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Streptosporangiales Streptosporangiaceae   Streptosporangiaceae bacterium
29772023 29772023 PRJNA929522_S_NODE_9951_length_242_cov_0.911243_g9881_i0 PRJNA929522 9951 242 0.911243 2.20520806 Actinomycetota bacterium 2900548 Bacteria Bacteria 63.2 2.32e-9   NR MEK7424361.1 2900548 g9881 i0 44.2 2.82644628099174 77 39 91.7 2 1 222 86 161 MEK7424361.1 hypothetical protein [Actinomycetota bacterium] diamond 684 63.2 1 Bacteria   Bacillati Actinomycetota         Actinomycetota bacterium
29835292 29835292 PRJNA929522_S_NODE_5131_length_307_cov_1.841880_g5061_i0 PRJNA929522 5131 307 1.84188 5.6545716 Acidimicrobiales bacterium 2201156 Bacteria Bacteria 60.8 3.24e-8   NR MCB0964953.1 2201156 g5061 i0 44 0.732899022801303 75 41 73.3 1 3 227 382 455 MCB0964953.1 trypsin-like serine protease [Acidimicrobiales bacterium] diamond 225 60.8 1 Bacteria   Bacillati Actinomycetota Acidimicrobiia Acidimicrobiales     Acidimicrobiales bacterium
29905774 29905774 PRJNA929522_S_NODE_4691_length_318_cov_0.942857_g4621_i0 PRJNA929522 4691 318 0.942857 2.99828526 Bacteria 2 Bacteria Bacteria 149 2.27e-39   NR MCZ7663487.1 2026888 g4621 i0 65.4 19.5943396226415 104 36 98.1 0 315 4 106 209 MCZ7663487.1 acetate--CoA ligase [Thermoleophilia bacterium] diamond 6231 150 0.993333333333333 Bacteria   Bacillati Actinomycetota Thermoleophilia       Thermoleophilia bacterium
30000528 30000528 PRJNA929522_S_NODE_9891_length_242_cov_1.284024_g9821_i0 PRJNA929522 9891 242 1.284024 3.10733808 Bacteria 2 Bacteria Bacteria 88.2 3.75e-18   NR WP_331214428.1 1544735 g9821 i0 51.9 6.94214876033058 81 35 99.2 2 242 3 151 228 WP_331214428.1 S8 family serine peptidase [Plantactinospora sonchi] diamond 1680 89 0.991011235955056 Bacteria   Bacillati Actinomycetota Actinomycetes Micromonosporales Micromonosporaceae Plantactinospora Plantactinospora sonchi
30214317 30214317 PRJNA929522_S_NODE_3212_length_374_cov_1.671096_g3142_i0 PRJNA929522 3212 374 1.671096 6.24989904 Micromonospora profundi 1420889 Bacteria Bacteria 44.3 0.00963   NR WP_377668724.1 1420889 g3142 i0 30.1 0.665775401069519 83 56 65 1 72 314 25 107 WP_377668724.1 hypothetical protein [Micromonospora profundi] diamond 249 44.3 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micromonosporales Micromonosporaceae Micromonospora Micromonospora profundi
30246283 30246283 PRJNA929522_S_NODE_9272_length_246_cov_0.890173_g9202_i0 PRJNA929522 9272 246 0.890173 2.18982558 Micromonospora tulbaghiae 479978 Bacteria Bacteria 42.7 0.0206   NR WP_120573435.1 479978 g9202 i0 45 0.48780487804878 40 22 48.8 0 11 130 82 121 WP_120573435.1 DUF3846 domain-containing protein [Micromonospora tulbaghiae] diamond 120 42.7 1 Bacteria   Bacillati Actinomycetota Actinomycetes Micromonosporales Micromonosporaceae Micromonospora Micromonospora tulbaghiae
30278011 30278011 PRJNA929522_S_NODE_3692_length_351_cov_1.255396_g3622_i0 PRJNA929522 3692 351 1.255396 4.40643996 Actinophytocola sp. 1872138 Bacteria Bacteria 82 2.64e-16   NR WP_327562099.1 1872138 g3622 i0 41.2 2.90598290598291 119 64 99.1 3 2 349 14 129 WP_327562099.1 MIP/aquaporin family protein [Actinophytocola sp.] diamond 1020 82 1 Bacteria   Bacillati Actinomycetota Actinomycetes Pseudonocardiales Pseudonocardiaceae Actinophytocola Actinophytocola sp.
30404472 30404472 PRJNA929522_S_NODE_10053_length_241_cov_1.375000_g9983_i0 PRJNA929522 10053 241 1.375 3.31375 Kitasatospora sp. NBC_ 1871188 Bacteria Bacteria 52.8 1.02e-5   NR WP_327681544.1 2903568 g9983 i0 40.7 1.48132780082988 59 19 73.4 2 182 6 52 94 WP_327681544.1 alpha/beta fold hydrolase [Kitasatospora sp. NBC_00458] diamond 357 52.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Kitasatospora Kitasatospora sp. NBC_00458
30561751 30561751 PRJNA929522_S_NODE_7133_length_269_cov_1.938776_g7063_i0 PRJNA929522 7133 269 1.938776 5.21530744 Gaiellaceae bacterium 2838783 Bacteria Bacteria 57 2.73e-7   NR HEU4451001.1 2838783 g7063 i0 39.2 1.73977695167286 79 48 88.1 0 23 259 148 226 HEU4451001.1 glutathione S-transferase family protein [Gaiellaceae bacterium] diamond 468 57 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Gaiellales Gaiellaceae   Gaiellaceae bacterium
30593496 30593496 PRJNA929522_S_NODE_3373_length_365_cov_1.801370_g3303_i0 PRJNA929522 3373 365 1.80137 6.5750005 Kitasatospora sp. NPDC 1871188 Bacteria Bacteria 48.1 0.00174   NR WP_387883420.1 3346385 g3303 i0 36.2 0.953424657534247 58 37 47.7 0 7 180 71 128 WP_387883420.1 tyrosinase family protein [Kitasatospora sp. NPDC058218] diamond 348 48.1 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Kitasatospora Kitasatospora sp. NPDC058218
30972882 30972882 PRJNA929522_S_NODE_5194_length_306_cov_0.991416_g5124_i0 PRJNA929522 5194 306 0.991416 3.03373296 Streptomyces collinus 42684 Bacteria Bacteria 43.9 0.018   NR WP_388068945.1 42684 g5124 i0 36.1 0.813725490196078 83 48 81.4 2 10 258 45 122 WP_388068945.1 phosphatase PAP2 family protein [Streptomyces collinus] diamond 249 43.9 1 Bacteria   Bacillati Actinomycetota Actinomycetes Kitasatosporales Streptomycetaceae Streptomyces Streptomyces collinus
31043373 31043373 PRJNA929522_S_NODE_6395_length_282_cov_1.009569_g6325_i0 PRJNA929522 6395 282 1.009569 2.84698458 Bacteria 2 Bacteria Bacteria 90.5 8.26e-19   NR MCP3934088.1 1883427 g6325 i0 56 7.86170212765957 75 33 79.8 0 234 10 393 467 MCP3934088.1 M20/M25/M40 family metallo-hydrolase [Actinomycetes bacterium] diamond 2217 91.3 0.991237677984666 Bacteria   Bacillati Actinomycetota Actinomycetes       Actinomycetes bacterium
31162046 31162046 PRJNA929522_S_NODE_8915_length_248_cov_1.320000_g8845_i0 PRJNA929522 8915 248 1.32 3.2736 Thermoleophilaceae bacterium 2732252 Bacteria Bacteria 43.1 0.0281   NR HEV7845980.1 2732252 g8845 i0 40.9 0.798387096774194 66 29 75 2 10 195 112 171 HEV7845980.1 S8 family serine peptidase [Thermoleophilaceae bacterium] diamond 198 43.1 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Thermoleophilales Thermoleophilaceae   Thermoleophilaceae bacterium
31320369 31320369 PRJNA929522_S_NODE_5815_length_293_cov_0.922727_g5745_i0 PRJNA929522 5815 293 0.922727 2.70359011 uncultured Friedmanniella sp. 335381 Bacteria Bacteria 40.8 0.0376   NR CAA9288525.1 335381 g5745 i0 58.6 0.296928327645051 29 12 29.7 0 108 194 18 46 CAA9288525.1 MAG: hypothetical protein AVDCRST_MAG48-336, partial [uncultured Friedmanniella sp.] diamond 87 40.8 1 Bacteria   Bacillati Actinomycetota Actinomycetes Propionibacteriales Nocardioidaceae Friedmanniella uncultured Friedmanniella sp.
32181752 32181752 PRJNA929522_S_NODE_1138_length_604_cov_2.254237_g1072_i0 PRJNA929522 1138 604 2.254237 13.61559148 Natronosporangium 2920401 Bacteria Bacteria 124 6.95e-29   NR MPZ25888.1 1873464 g1072 i0 47.6 2.93543046357616 147 62 68.5 4 5 418 188 328 MPZ25888.1 S8 family serine peptidase [Micromonosporaceae bacterium] diamond 1773 125 0.992 Bacteria   Bacillati Actinomycetota Actinomycetes Micromonosporales Micromonosporaceae   Micromonosporaceae bacterium
32269645 32269645 PRJNA929522_S_NODE_5878_length_291_cov_2.201835_g5808_i0 PRJNA929522 5878 291 2.201835 6.40733985 Solirubrobacteraceae bacterium 2586742 Bacteria Bacteria 43.9 0.0225   NR HST34222.1 2586742 g5808 i0 69.2 0.597938144329897 26 8 26.8 0 213 290 60 85 HST34222.1 tyrosinase family protein [Solirubrobacteraceae bacterium] diamond 174 43.9 1 Bacteria   Bacillati Actinomycetota Thermoleophilia Solirubrobacterales Solirubrobacteraceae   Solirubrobacteraceae bacterium
32750284 32750284 PRJNA929522_S_NODE_5760_length_294_cov_1.045249_g5690_i0 PRJNA929522 5760 294 1.045249 3.07303206 Bacteria 2 Bacteria Bacteria 109 2.66e-25   NR WP_337827359.1 687430 g5690 i0 64.3 26.3775510204082 70 25 71.4 0 293 84 640 709 WP_337827359.1 S9 family peptidase [Pseudonocardia sp. TMWB2A] diamond 7755 110 0.990909090909091 Bacteria   Bacillati Actinomycetota Actinomycetes Pseudonocardiales Pseudonocardiaceae Pseudonocardia Pseudonocardia sp. TMWB2A

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;