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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA929522" and tax_kingdom = "Promethearchaeati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Promethearchaeati · 4 ✖

bioproject 1

  • PRJNA929522 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18756861 18756861 PRJNA929522_S_NODE_1875_length_485_cov_1.495146_g1805_i0 PRJNA929522 1875 485 1.495146 7.2514581 Promethearchaeota archaeon CR_4 1849166 Archaea Archaea 224 5.5e-69   NR OLS15498.1 1849166 g1805 i0 65.8 0.995876288659794 161 54 99.6 1 483 1 118 277 OLS15498.1 MAG: protein AtoB1 [Promethearchaeota archaeon CR_4] diamond 483 224 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4
27846054 27846054 PRJNA929522_S_NODE_2264_length_442_cov_4.439024_g2194_i0 PRJNA929522 2264 442 4.439024 19.62048608 Promethearchaeota archaeon CR_4 1849166 Archaea Archaea 52.4 2.18e-5   NR OLS12533.1 1849166 g2194 i0 32.7 0.746606334841629 110 69 74.7 2 34 363 11 115 OLS12533.1 MAG: hypothetical protein RBG13Loki_3844 [Promethearchaeota archaeon CR_4] diamond 330 52.4 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4
28035716 28035716 PRJNA929522_S_NODE_2105_length_458_cov_1.846753_g2035_i0 PRJNA929522 2105 458 1.846753 8.45812874 Promethearchaeota archaeon CR_4 1849166 Archaea Archaea 59.3 5.78e-8   NR OLS12533.1 1849166 g2035 i0 28.9 0.792576419213974 121 83 79.3 2 68 430 9 126 OLS12533.1 MAG: hypothetical protein RBG13Loki_3844 [Promethearchaeota archaeon CR_4] diamond 363 59.3 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4
29613982 29613982 PRJNA929522_S_NODE_3430_length_362_cov_2.048443_g3360_i0 PRJNA929522 3430 362 2.048443 7.41536366 Promethearchaeota archaeon CR_4 1849166 Archaea Archaea 45.4 0.00463   NR OLS12533.1 1849166 g3360 i0 32.6 0.712707182320442 86 55 71.3 2 275 18 9 91 OLS12533.1 MAG: hypothetical protein RBG13Loki_3844 [Promethearchaeota archaeon CR_4] diamond 258 45.4 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon CR_4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;