RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA928559" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA928559 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30341336 30341336 PRJNA928559_P_NODE_61292_length_445_cov_2.145161_g59723_i0 PRJNA928559 61292 445 2.145161 9.54596645 Candidatus Baltobacteraceae bacterium 3107660 Bacteria Bacteria 53.9 2.02e-6   NR MFN2529529.1 2952909 g59723 i0 58.5 1.86067415730337 41 17 27.6 0 400 278 7 47 MFN2529529.1 elongation factor Ts [Candidatus Baltobacteraceae bacterium] diamond 828 53.9 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae   Candidatus Baltobacteraceae bacterium
32900469 32900469 PRJNA928559_P_NODE_209720_length_244_cov_0.912281_g208151_i0 PRJNA928559 209720 244 0.912281 2.22596564 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 74.3 4.1e-15   NR MFA5506695.1 3107663 g208151 i0 54.1 0.909836065573771 74 33 89.8 1 221 3 1 74 MFA5506695.1 preprotein translocase subunit SecE [Vulcanimicrobiota bacterium] diamond 222 74.3 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;