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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA928559" and tax_phylum = "Methanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA928559 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26905476 26905476 PRJNA928559_P_NODE_188181_length_253_cov_0.866667_g186612_i0 PRJNA928559 188181 253 0.866667 2.19266751 Archaea 2157 Archaea Archaea 55.1 1.09e-6   NR RMG30150.1 2026739 g186612 i0 40 1.68379446640316 70 42 83 0 215 6 7 76 RMG30150.1 MAG: aquaporin [Methanobacteriota archaeon] diamond 426 55.1 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27814769 27814769 PRJNA928559_P_NODE_191004_length_252_cov_0.871508_g189435_i0 PRJNA928559 191004 252 0.871508 2.19620016 Methanobacteriota archaeon 2026739 Archaea Archaea 117 1.5e-28   NR RYE98581.1 2026739 g189435 i0 65 0.952380952380952 80 28 95.2 0 11 250 492 571 RYE98581.1 MAG: protein kinase, partial [Methanobacteriota archaeon] diamond 240 117 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
27821901 27821901 PRJNA928559_P_NODE_4384_length_1414_cov_4.498136_g3634_i0 PRJNA928559 4384 1414 4.498136 63.60364304 root 1 Root_unresolved Root_unresolved 123 4.41e-29   NR HET8689243.1 2213 g3634 i0 65.9 0.386138613861386 88 29 18.7 1 1149 1412 18 104 HET8689243.1 hypothetical protein [Methanosarcina sp.] diamond 546 124 0.991935483870968 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
28572258 28572258 PRJNA928559_P_NODE_173007_length_265_cov_1.947917_g171438_i0 PRJNA928559 173007 265 1.947917 5.16198005 Methanobacteriota archaeon 2026739 Archaea Archaea 51.2 1.41e-6   NR PXF18799.1 2026739 g171438 i0 56.3 0.362264150943396 32 14 36.2 0 264 169 3 34 PXF18799.1 MAG: hypothetical protein CXX76_01005 [Methanobacteriota archaeon] diamond 96 51.2 1 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
28667167 28667167 PRJNA928559_P_NODE_144547_length_294_cov_0.814480_g142978_i0 PRJNA928559 144547 294 0.81448 2.3945712 Haloferax volcanii 2246 Archaea Archaea 45.1 0.00344   NR WP_144859680.1 2246 g142978 i0 43.8 0.979591836734694 48 23 49 1 61 204 17 60 WP_144859680.1 aminotransferase class V-fold PLP-dependent enzyme, partial [Haloferax volcanii] diamond 288 45.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax volcanii
29747433 29747433 PRJNA928559_P_NODE_87150_length_381_cov_1.545455_g85581_i0 PRJNA928559 87150 381 1.545455 5.88818355 root 1 Root_unresolved Root_unresolved 141 3.35e-39   NR WP_011450032.1 2203 g85581 i0 56.7 2.01574803149606 127 45 100 2 1 381 62 178 WP_011450032.1 pseudaminic acid cytidylyltransferase [Methanospirillum hungatei] diamond 768 141 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanospirillaceae Methanospirillum Methanospirillum hungatei
30119464 30119464 PRJNA928559_P_NODE_191812_length_251_cov_1.752809_g190243_i0 PRJNA928559 191812 251 1.752809 4.39955059 Methanobacterium alkalithermotolerans 2731220 Archaea Archaea 45.4 0.00425   NR QUH24244.1 2731220 g190243 i0 44.2 1.02788844621514 43 24 51.4 0 249 121 103 145 QUH24244.1 ADP-ribosylglycohydrolase family protein [Methanobacterium alkalithermotolerans] diamond 258 45.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium alkalithermotolerans
31383730 31383730 PRJNA928559_P_NODE_161336_length_276_cov_1.807882_g159767_i0 PRJNA928559 161336 276 1.807882 4.98975432 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 47 0.00173   NR MDD4281430.1 2099674 g159767 i0 38 1.80434782608696 79 37 85.9 3 268 32 449 515 MDD4281430.1 tetratricopeptide repeat protein [Candidatus Methanofastidiosia archaeon] diamond 498 47 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
31541884 31541884 PRJNA928559_P_NODE_174496_length_264_cov_1.308901_g172927_i0 PRJNA928559 174496 264 1.308901 3.45549864 Methanopyrus sp. SNP6 1937005 Archaea Archaea 43.1 0.0335   NR WP_168168609.1 1937005 g172927 i0 42.2 0.727272727272727 64 34 71.6 2 208 20 178 239 WP_168168609.1 molybdopterin molybdotransferase MoeA [Methanopyrus sp. SNP6] diamond 192 43.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanopyri Methanopyrales Methanopyraceae Methanopyrus Methanopyrus sp. SNP6
31605065 31605065 PRJNA928559_P_NODE_119436_length_326_cov_1.320158_g117867_i0 PRJNA928559 119436 326 1.320158 4.30371508 Halonotius pteroides 268735 Archaea Archaea 59.3 1.58e-7   NR WP_133305096.1 268735 g117867 i0 45.5 1.69325153374233 112 52 99.4 5 3 326 920 1026 WP_133305096.1 GLUG motif-containing protein [Halonotius pteroides] diamond 552 59.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halonotius Halonotius pteroides
31675324 31675324 PRJNA928559_P_NODE_149217_length_288_cov_3.139535_g147648_i0 PRJNA928559 149217 288 3.139535 9.0418608 root 1 Root_unresolved Root_unresolved 110 3.58e-27   NR HET8689265.1 2213 g147648 i0 60 7.91666666666667 95 38 99 0 286 2 12 106 HET8689265.1 hypothetical protein [Methanosarcina sp.] diamond 2280 111 0.990990990990991 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
32869074 32869074 PRJNA928559_P_NODE_193260_length_251_cov_0.876404_g191691_i0 PRJNA928559 193260 251 0.876404 2.19977404 Thermococcus sp. 35749 Archaea Archaea 94.7 5.84e-21   NR WP_297490927.1 35749 g191691 i0 61.4 7.9601593625498 83 29 99.2 1 249 1 15 94 WP_297490927.1 L-threonylcarbamoyladenylate synthase [Thermococcus sp.] diamond 1998 94.7 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;