RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA928559" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA928559 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30309706 30309706 PRJNA928559_P_NODE_24112_length_654_cov_8.986231_g22614_i0 PRJNA928559 24112 654 8.986231 58.76995074 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 86.7 7.09e-16   NR HZM05732.1 2973664 g22614 i0 52.9 0.770642201834862 87 38 39.9 2 9 269 30 113 HZM05732.1 WGR domain-containing protein [Candidatus Saccharimonadales bacterium] diamond 504 86.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
31193476 31193476 PRJNA928559_P_NODE_188215_length_253_cov_0.866667_g186646_i0 PRJNA928559 188215 253 0.866667 2.19266751 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 79.3 5.59e-15   NR MDZ7786289.1 2026720 g186646 i0 54.8 1.73122529644269 73 31 86.6 1 226 8 441 511 MDZ7786289.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 438 79.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;