RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA928559" and tax_phylum = "Candidatus Kaiseribacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kaiseribacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA928559 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27940956 27940956 PRJNA928559_P_NODE_59265_length_451_cov_10.785714_g57698_i0 PRJNA928559 59265 451 10.785714 48.64357014 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 117 3.45e-28   NR MCA9356611.1 2030810 g57698 i0 55.3 0.758314855875831 114 49 74.5 1 116 451 29 142 MCA9356611.1 hypothetical protein [Candidatus Kaiserbacteria bacterium] diamond 342 117 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium
32396076 32396076 PRJNA928559_P_NODE_3719_length_1523_cov_13.465517_g3052_i0 PRJNA928559 3719 1523 13.465517 205.07982391 Candidatus Kaiserbacteria bacterium 2030810 Bacteria Bacteria 263 2.51e-79   NR MCA9356611.1 2030810 g3052 i0 54.9 0.520026263952725 264 119 52 0 1522 731 137 400 MCA9356611.1 hypothetical protein [Candidatus Kaiserbacteria bacterium] diamond 792 263 1 Bacteria Bacteria candidate phyla   Candidatus Kaiseribacteriota         Candidatus Kaiserbacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;