RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA928559" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 5 ✖

bioproject 1

  • PRJNA928559 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27150792 27150792 PRJNA928559_P_NODE_184802_length_255_cov_1.626374_g183233_i0 PRJNA928559 184802 255 1.626374 4.1472537 Deinococcus caeni 569127 Bacteria Bacteria 129 8.02e-37   NR GAA5439256.1 569127 g183233 i0 100 0.988235294117647 84 0 98.8 0 253 2 14 97 GAA5439256.1 hypothetical protein Dcae01_00755 [Deinococcus caeni] diamond 252 129 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus caeni
28130377 28130377 PRJNA928559_P_NODE_153805_length_284_cov_1.241706_g152236_i0 PRJNA928559 153805 284 1.241706 3.52644504 Deinococcus reticulitermitis 856736 Bacteria Bacteria 178 1.28e-49   NR WP_092265518.1 856736 g152236 i0 93.6 0.992957746478873 94 6 99.3 0 1 282 944 1037 WP_092265518.1 S-layer homology domain-containing protein [Deinococcus reticulitermitis] diamond 282 178 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus reticulitermitis
30372776 30372776 PRJNA928559_P_NODE_203872_length_246_cov_1.647399_g202303_i0 PRJNA928559 203872 246 1.647399 4.05260154 uncultured Meiothermus sp. 157471 Bacteria Bacteria 46.2 0.00141   NR WP_299425351.1 157471 g202303 i0 56.5 0.560975609756098 46 20 56.1 0 67 204 2 47 WP_299425351.1 hypothetical protein [uncultured Meiothermus sp.] diamond 138 46.2 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Meiothermus uncultured Meiothermus sp.
30600589 30600589 PRJNA928559_P_NODE_204933_length_246_cov_0.901734_g203364_i0 PRJNA928559 204933 246 0.901734 2.21826564 Truepera 332248 Bacteria Bacteria 71.2 2.36e-12   NR WP_013177027.1 332249 g203364 i0 40.7 2.01219512195122 81 48 98.8 0 2 244 42 122 WP_013177027.1 hypothetical protein [Truepera radiovictrix] diamond 495 71.2 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
32806077 32806077 PRJNA928559_P_NODE_201060_length_247_cov_2.304598_g199491_i0 PRJNA928559 201060 247 2.304598 5.69235706 Thermaceae bacterium 2614257 Bacteria Bacteria 48.1 4.43e-4   NR MBF6594700.1 2614257 g199491 i0 48.3 1.46963562753036 60 30 72.9 1 12 191 16 74 MBF6594700.1 nucleoside hydrolase [Thermaceae bacterium] diamond 363 48.1 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae   Thermaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;