RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA924320" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_kingdom 3

tax_superkingdom 1

  • Viruses · 28 ✖

tax_clade 1

bioproject 1

  • PRJNA924320 · 28 ✖

analysis 1

  • diamond · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9827244 9827244 PRJNA924320_S_NODE_8288_length_337_cov_1.711806_g8146_i0 PRJNA924320 8288 337 1.711806 5.76878622 Fadolivirus algeromassiliense 3060017 Viruses Viruses 171 3.8e-49   NR YP_010803269.1 3060017 g8146 i0 69.4 0.98813056379822 111 33 98.8 1 5 337 28 137 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 333 171 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
26676208 26676208 PRJNA924320_S_NODE_52741_length_163_cov_1.789474_g52599_i0 PRJNA924320 52741 163 1.789474 2.91684262 Vibrio virus VPMCC5 2900301 Viruses Viruses 75.5 1.2e-14   NR UIW11075.1 2900301 g52599 i0 68.5 2.98159509202454 54 17 99.4 0 2 163 162 215 UIW11075.1 putative head completion adaptor [Vibrio virus VPMCC5] diamond 486 75.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Zobellviridae   Vibrio virus VPMCC5
26961203 26961203 PRJNA924320_S_NODE_32162_length_193_cov_2.666667_g32020_i0 PRJNA924320 32162 193 2.666667 5.14666731 Fadolivirus algeromassiliense 3060017 Viruses Viruses 76.3 2.64e-14   NR YP_010803269.1 3060017 g32020 i0 56.9 0.901554404145078 58 25 90.2 0 193 20 283 340 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 174 76.3 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
27372693 27372693 PRJNA924320_S_NODE_32443_length_193_cov_1.062500_g32301_i0 PRJNA924320 32443 193 1.0625 2.050625 Pithovirus LCDPAC 2506600 Viruses Viruses 43.9 0.00621   NR QBK84707.1 2506600 g32301 i0 36.4 1.0259067357513 66 38 99.5 2 2 193 22 85 QBK84707.1 MAG: hypothetical protein LCDPAC01_01880 [Pithovirus LCDPAC01] diamond 198 43.9 1 Viruses Pithoviruses             Pithovirus LCDPAC01
27435774 27435774 PRJNA924320_S_NODE_4463_length_446_cov_1.921914_g4322_i0 PRJNA924320 4463 446 1.921914 8.57173644 Fadolivirus algeromassiliense 3060017 Viruses Viruses 202 9.21e-61   NR YP_010803269.1 3060017 g4322 i0 63.5 0.995515695067265 148 54 99.6 0 444 1 134 281 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 444 202 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
27467208 27467208 PRJNA924320_S_NODE_24843_length_213_cov_2.487805_g24701_i0 PRJNA924320 24843 213 2.487805 5.29902465 Fadolivirus algeromassiliense 3060017 Viruses Viruses 104 1.97e-24   NR YP_010803269.1 3060017 g24701 i0 67.1 0.985915492957746 70 23 98.6 0 212 3 337 406 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 210 104 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
27783002 27783002 PRJNA924320_S_NODE_18904_length_237_cov_1.207447_g18762_i0 PRJNA924320 18904 237 1.207447 2.86164939 Prokaryotic dsDNA virus sp. 2591644 Viruses Viruses 66.2 2.15e-11   NR QDP53372.1 2591644 g18762 i0 50 1.91139240506329 78 37 98.7 1 1 234 14 89 QDP53372.1 MAG: hypothetical protein Unbinned6805contig1000_34 [Prokaryotic dsDNA virus sp.] diamond 453 66.2 1 Viruses               Prokaryotic dsDNA virus sp.
28856183 28856183 PRJNA924320_S_NODE_1128_length_838_cov_2.510773_g1041_i0 PRJNA924320 1128 838 2.510773 21.04027774 uncultured virus 340016 Viruses Viruses 102 3.4e-20   NR CAH6419193.1 340016 g1041 i0 28.1 1.99045346062053 278 178 94.9 6 795 1 672 940 CAH6419193.1 2-5 RNA ligase superfamily [uncultured virus] diamond 1668 102 1 Viruses               uncultured virus
28856211 28856211 PRJNA924320_S_NODE_48408_length_166_cov_0.871795_g48266_i0 PRJNA924320 48408 166 0.871795 1.4471797 Caudoviricetes sp. 2832643 Viruses Viruses 95.5 3.56e-22   NR XOS48669.1 2832643 g48266 i0 80 0.993975903614458 55 11 99.4 0 166 2 52 106 XOS48669.1 MAG: hypothetical protein MSP0393_28 [Caudoviricetes sp.] diamond 165 95.5 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
28856212 28856212 PRJNA924320_S_NODE_49188_length_165_cov_1.698276_g49046_i0 PRJNA924320 49188 165 1.698276 2.8021554 Chuvivirus 2842604 Viruses Viruses 47.8 2.26e-4   NR WET19891.1 2842604 g49046 i0 58.8 0.618181818181818 34 14 61.8 0 159 58 464 497 WET19891.1 MAG: nucleoprotein [Sea turtle neural virus 1] diamond 102 47.8 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Chuvivirus Chuvivirus
29172244 29172244 PRJNA924320_S_NODE_17069_length_247_cov_1.227273_g16927_i0 PRJNA924320 17069 247 1.227273 3.03136431 Pithovirus LCPAC1 2506586 Viruses Viruses 66.2 1.92e-10   NR QBK89990.1 2506586 g16927 i0 49.2 0.716599190283401 59 30 71.7 0 70 246 137 195 QBK89990.1 MAG: phosphoribosyl transferase domain protein [Pithovirus LCPAC101] diamond 177 66.2 1 Viruses Pithoviruses             Pithovirus LCPAC101
29495100 29495100 PRJNA924320_S_NODE_50250_length_165_cov_0.879310_g50108_i0 PRJNA924320 50250 165 0.87931 1.4508615 Orthopoxvirus 10242 Viruses Viruses 85.5 1.31e-19   NR AHF22124.1 10245 g50108 i0 70.4 19.6363636363636 54 16 98.2 0 2 163 53 106 AHF22124.1 thymidine kinase, partial [Vaccinia virus] diamond 3240 85.5 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus vaccinia
29613803 29613803 PRJNA924320_S_NODE_53850_length_163_cov_0.894737_g53708_i0 PRJNA924320 53850 163 0.894737 1.45842131 Mimivirus LCMiAC 2506609 Viruses Viruses 41.2 0.00556   NR QBK89300.1 2506609 g53708 i0 42.6 0.865030674846626 47 27 86.5 0 155 15 1 47 QBK89300.1 MAG: hypothetical protein LCMiAC02_03950, partial [Mimivirus LCMiAC02] diamond 141 41.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Mimivirus LCMiAC02
29645288 29645288 PRJNA924320_S_NODE_15870_length_254_cov_1.756098_g15728_i0 PRJNA924320 15870 254 1.756098 4.46048892 uncultured virus 340016 Viruses Viruses 82 5.1e-16   NR CAH6419317.1 340016 g15728 i0 51.9 0.933070866141732 79 38 93.3 0 13 249 105 183 CAH6419317.1 Domain of unknown function (DUF4419)-containing protein [uncultured virus] diamond 237 82 1 Viruses               uncultured virus
29740194 29740194 PRJNA924320_S_NODE_56370_length_161_cov_1.821429_g56228_i0 PRJNA924320 56370 161 1.821429 2.93250069 Acinetobacter phage APK2 2865959 Viruses Viruses 45.4 0.00137   NR UAW10085.1 2873375 g56228 i0 45 0.745341614906832 40 22 74.5 0 34 153 184 223 UAW10085.1 tailspike protein [Acinetobacter phage APK20] diamond 120 45.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Autographivirales Autoscriptoviridae Friunavirus Friunavirus APK20
30435753 30435753 PRJNA924320_S_NODE_7373_length_354_cov_3.577049_g7231_i0 PRJNA924320 7373 354 3.577049 12.66275346 Fadolivirus algeromassiliense 3060017 Viruses Viruses 70.9 1.62e-11   NR YP_010803269.1 3060017 g7231 i0 55.2 0.966101694915254 58 26 49.2 0 2 175 356 413 YP_010803269.1 ornithine decaroboxylase [Fadolivirus algeromassiliense] diamond 342 70.9 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
30593341 30593341 PRJNA924320_S_NODE_55213_length_162_cov_0.902655_g55071_i0 PRJNA924320 55213 162 0.902655 1.4623011 Pseudoalteromonas phage vB_PtuP_Slicky 3038240 Viruses Viruses 81.6 5.98e-17   NR WGH49963.1 3038240 g55071 i0 71.4 0.907407407407407 49 14 90.7 0 3 149 16 64 WGH49963.1 hypothetical protein [Pseudoalteromonas phage vB_PtuP_Slicky01] diamond 147 81.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Pseudoalteromonas phage vB_PtuP_Slicky01
31067561 31067561 PRJNA924320_S_NODE_7095_length_360_cov_3.418006_g6953_i0 PRJNA924320 7095 360 3.418006 12.3048216 Pseudomonas phage GP1 2055238 Viruses Viruses 49.3 7.01e-4   NR SPF82137.1 2055238 g6953 i0 56.8 0.308333333333333 37 16 30.8 0 4 114 557 593 SPF82137.1 The actual alignment was detected with superfamily member TIGR01709: [Pseudomonas phage GP100] diamond 111 49.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Zobellviridae   Pseudomonas phage GP100
31256968 31256968 PRJNA924320_S_NODE_46215_length_167_cov_0.864407_g46073_i0 PRJNA924320 46215 167 0.864407 1.44355969 Acanthamoeba castellanii medusavirus 2080449 Viruses Viruses 63.9 4.35e-10   NR YP_010804667.1 2080449 g46073 i0 51.8 2.01197604790419 56 25 97 1 164 3 232 287 YP_010804667.1 poly A polymerase regulatory subunit [Acanthamoeba castellanii medusavirus] diamond 336 63.9 1 Viruses               Acanthamoeba castellanii medusavirus
31288502 31288502 PRJNA924320_S_NODE_38275_length_180_cov_2.885496_g38133_i0 PRJNA924320 38275 180 2.885496 5.1938928 Catovirus CTV1 1977631 Viruses Viruses 79 2.71e-16   NR ARF08354.1 1977631 g38133 i0 60.3 7.76666666666667 58 23 96.7 0 6 179 6 63 ARF08354.1 Ras family GTPase [Catovirus CTV1] diamond 1398 79 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus CTV1
31351962 31351962 PRJNA924320_S_NODE_56696_length_161_cov_1.232143_g56554_i0 PRJNA924320 56696 161 1.232143 1.98375023 Pimephales minnow adintovirus 2609864 Viruses Viruses 59.3 9.64e-9   NR DAC81394.1 2609864 g56554 i0 56.9 0.950310559006211 51 22 95 0 9 161 51 101 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 153 59.3 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
31668076 31668076 PRJNA924320_S_NODE_13377_length_273_cov_1.138393_g13235_i0 PRJNA924320 13377 273 1.138393 3.10781289 Vibrio phage 1.235.O._1 1881352 Viruses Viruses 117 3.05e-28   NR AUR96941.1 1881352 g13235 i0 71.2 2.37362637362637 73 21 80.2 0 53 271 1 73 AUR96941.1 head-to-tail joining protein [Vibrio phage 1.235.O._10N.261.52.B2] diamond 648 117 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Zobellviridae   Vibrio phage 1.235.O._10N.261.52.B2
31738502 31738502 PRJNA924320_S_NODE_48177_length_166_cov_0.871795_g48035_i0 PRJNA924320 48177 166 0.871795 1.4471797 Viruses 10239 Viruses Viruses 73.2 9.8e-14   NR SPF82143.1 2055238 g48035 i0 72.9 2.63855421686747 48 13 86.7 0 148 5 5 52 SPF82143.1 Phage protein [Pseudomonas phage GP100] diamond 438 73.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Zobellviridae   Pseudomonas phage GP100
31928440 31928440 PRJNA924320_S_NODE_817_length_960_cov_2.003293_g744_i0 PRJNA924320 817 960 2.003293 19.2316128 Viruses 10239 Viruses Viruses 248 6.79e-77   NR AUR96944.1 1881352 g744 i0 75 1.00625 160 40 50 0 474 953 1 160 AUR96944.1 major capsid protein [Vibrio phage 1.235.O._10N.261.52.B2] diamond 966 248 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Zobellviridae   Vibrio phage 1.235.O._10N.261.52.B2
32111129 32111129 PRJNA924320_S_NODE_28818_length_202_cov_1.215686_g28676_i0 PRJNA924320 28818 202 1.215686 2.45568572 Rheinheimera phage vB_RspM_Barba18A 2565657 Viruses Viruses 70.9 8.35e-14   NR YP_009823000.1 2565657 g28676 i0 53.1 1.9009900990099 64 30 95 0 197 6 47 110 YP_009823000.1 endolysin [Rheinheimera phage vB_RspM_Barba18A] diamond 384 70.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Barbavirus Barbavirus barba18A
32490953 32490953 PRJNA924320_S_NODE_39099_length_179_cov_1.176923_g38957_i0 PRJNA924320 39099 179 1.176923 2.10669217 Barrevirus sp. 2487763 Viruses Viruses 45.1 0.00238   NR AYV77211.1 2487763 g38957 i0 32.3 1.08938547486034 65 32 88.8 1 163 5 33 97 AYV77211.1 MAG: hypothetical protein Barrevirus19_6 [Barrevirus sp.] diamond 195 45.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Barrevirus sp.
32743166 32743166 PRJNA924320_S_NODE_26860_length_207_cov_1.936709_g26718_i0 PRJNA924320 26860 207 1.936709 4.00898763 Citrobacter phage CVT22 1622234 Viruses Viruses 83.6 9.33e-17   NR YP_009168387.1 1622234 g26718 i0 63.6 1.91304347826087 66 24 95.7 0 6 203 515 580 YP_009168387.1 head-tail adaptor [Citrobacter phage CVT22] diamond 396 83.6 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Zobellviridae Citrovirus Citrovirus coptotermitis
32900317 32900317 PRJNA924320_S_NODE_20000_length_232_cov_0.836066_g19858_i0 PRJNA924320 20000 232 0.836066 1.93967312 Satyrvirus sp. 2487771 Viruses Viruses 78.6 4.47e-17   NR AYV85056.1 2487771 g19858 i0 68.5 1.39655172413793 54 17 69.8 0 2 163 23 76 AYV85056.1 MAG: ubiquitin-domain-containing protein [Satyrvirus sp.] diamond 324 78.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Satyrvirus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;