RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA924320" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA924320 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7277178 7277178 PRJNA924320_S_NODE_14766_length_262_cov_1.291080_g14624_i0 PRJNA924320 14766 262 1.29108 3.3826296 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 100 1.24e-22   NR XP_004339258.1 1257118 g14624 i0 62.1 0.99618320610687 87 33 99.6 0 1 261 402 488 XP_004339258.1 dihydropyrimidinase [Acanthamoeba castellanii str. Neff] diamond 261 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17477198 17477198 PRJNA924320_S_NODE_11454_length_292_cov_1.427984_g11312_i0 PRJNA924320 11454 292 1.427984 4.16971328 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 160 9.23e-45   NR XP_004344078.1 1257118 g11312 i0 83.2 1.96232876712329 95 16 97.6 0 290 6 153 247 XP_004344078.1 Sadenosyl-L-homocysteine hydrolase, putative [Acanthamoeba castellanii str. Neff] diamond 573 160 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27088012 27088012 PRJNA924320_S_NODE_27462_length_206_cov_0.923567_g27320_i0 PRJNA924320 27462 206 0.923567 1.90254802 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 64.3 2.11e-10   NR XP_004367595.1 1257118 g27320 i0 46.2 0.946601941747573 65 35 94.7 0 2 196 80 144 XP_004367595.1 RAB8D, putative [Acanthamoeba castellanii str. Neff] diamond 195 64.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27182545 27182545 PRJNA924320_S_NODE_51942_length_164_cov_0.886957_g51800_i0 PRJNA924320 51942 164 0.886957 1.45460948 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.5 7.08e-9   NR XP_004334476.1 1257118 g51800 i0 44.2 1.86585365853659 52 29 95.1 0 160 5 392 443 XP_004334476.1 MBOAT family protein [Acanthamoeba castellanii str. Neff] diamond 306 60.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27372702 27372702 PRJNA924320_S_NODE_48223_length_166_cov_0.871795_g48081_i0 PRJNA924320 48223 166 0.871795 1.4471797 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 59.7 1.28e-9   NR XP_004333168.1 1257118 g48081 i0 48 2.62048192771084 50 26 90.4 0 159 10 8 57 XP_004333168.1 developmental protein, partial [Acanthamoeba castellanii str. Neff] diamond 435 59.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27530238 27530238 PRJNA924320_S_NODE_3423_length_503_cov_2.651982_g3283_i0 PRJNA924320 3423 503 2.651982 13.33946946 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 129 7.6e-34   NR XP_004335873.1 1257118 g3283 i0 53.6 5.75546719681909 125 57 74.6 1 494 120 22 145 XP_004335873.1 RNA recognition domain containing protein [Acanthamoeba castellanii str. Neff] diamond 2895 129 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27625093 27625093 PRJNA924320_S_NODE_26084_length_210_cov_1.062112_g25942_i0 PRJNA924320 26084 210 1.062112 2.2304352 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 60.1 9.71e-9   NR XP_004341641.1 1257118 g25942 i0 42.3 1.11428571428571 78 36 98.6 2 208 2 24 101 XP_004341641.1 uncharacterized protein ACA1_270300 [Acanthamoeba castellanii str. Neff] diamond 234 60.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27688546 27688546 PRJNA924320_S_NODE_42304_length_173_cov_1.233871_g42162_i0 PRJNA924320 42304 173 1.233871 2.13459683 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 85.9 1.96e-19   NR ABD46547.1 5755 g42162 i0 61.4 0.988439306358382 57 22 98.8 0 173 3 66 122 ABD46547.1 PfpI family peptidase, partial [Acanthamoeba castellanii] diamond 171 85.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28856191 28856191 PRJNA924320_S_NODE_19828_length_232_cov_2.043716_g19686_i0 PRJNA924320 19828 232 2.043716 4.74142112 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 85.9 2.04e-17   NR XP_004334802.1 1257118 g19686 i0 59 1.00862068965517 78 30 98.3 1 230 3 751 828 XP_004334802.1 Fbox domain containing protein [Acanthamoeba castellanii str. Neff] diamond 234 85.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29014552 29014552 PRJNA924320_S_NODE_23448_length_218_cov_1.508876_g23306_i0 PRJNA924320 23448 218 1.508876 3.28934968 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 129 2.03e-33   NR XP_004344078.1 1257118 g23306 i0 84.7 3.96330275229358 72 11 99.1 0 217 2 381 452 XP_004344078.1 Sadenosyl-L-homocysteine hydrolase, putative [Acanthamoeba castellanii str. Neff] diamond 864 129 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31074666 31074666 PRJNA924320_S_NODE_14235_length_266_cov_1.410138_g14093_i0 PRJNA924320 14235 266 1.410138 3.75096708 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 79.7 4.85e-15   NR XP_004338045.1 1257118 g14093 i0 42.5 3.91353383458647 87 46 98.1 2 266 6 114 196 XP_004338045.1 coatomer subunit beta'2, putative [Acanthamoeba castellanii str. Neff] diamond 1041 80.5 0.990062111801242 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32111142 32111142 PRJNA924320_S_NODE_4618_length_439_cov_2.564103_g4477_i0 PRJNA924320 4618 439 2.564103 11.25641217 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 121 1.26e-28   NR XP_004336565.1 1257118 g4477 i0 39.7 0.997722095671982 146 88 99.8 0 2 439 2718 2863 XP_004336565.1 Poly(ADP-ribose) polymerase catalytic domain containing protein [Acanthamoeba castellanii str. Neff] diamond 438 121 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;