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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA924320" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA924320 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20025760 20025760 PRJNA924320_S_NODE_17836_length_242_cov_2.378238_g17694_i0 PRJNA924320 17836 242 2.378238 5.75533596 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 127 4.75e-34   NR ADK26624.1 323453 g17694 i0 72.2 0.979338842975207 79 22 97.9 0 2 238 124 202 ADK26624.1 elongation factor 2, partial [Heteromita sp. PRA-74] diamond 237 127 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
28951295 28951295 PRJNA924320_S_NODE_13628_length_271_cov_1.148649_g13486_i0 PRJNA924320 13628 271 1.148649 3.11283879 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 75.5 1.1e-13   NR MES1914857.1 1215613 g13486 i0 47.2 0.985239852398524 89 43 96.3 3 6 266 257 343 MES1914857.1 hypothetical protein [Cercozoa sp. M6MM] diamond 267 75.5 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
31288510 31288510 PRJNA924320_S_NODE_46235_length_167_cov_0.864407_g46093_i0 PRJNA924320 46235 167 0.864407 1.44355969 Heteromita sp. PRA-74 323453 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.00143   NR ADK26624.1 323453 g46093 i0 79.2 0.431137724550898 24 5 43.1 0 162 91 253 276 ADK26624.1 elongation factor 2, partial [Heteromita sp. PRA-74] diamond 72 45.4 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita sp. PRA-74
32269466 32269466 PRJNA924320_S_NODE_27598_length_205_cov_1.647436_g27456_i0 PRJNA924320 27598 205 1.647436 3.3772438 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 77.8 1.81e-16   NR MES1912234.1 1215613 g27456 i0 58.2 1.9609756097561 67 25 98 2 3 203 54 117 MES1912234.1 hypothetical protein [Cercozoa sp. M6MM] diamond 402 77.8 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;