RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA924320" and tax_phylum = "Candidatus Uhriibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Uhriibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA924320 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30688093 30688093 PRJNA924320_S_NODE_52373_length_164_cov_0.886957_g52231_i0 PRJNA924320 52373 164 0.886957 1.45460948 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 42.4 0.0178   NR MBI4434489.1 2053634 g52231 i0 42.2 4.82926829268293 45 26 82.3 0 145 11 494 538 MBI4434489.1 class I tRNA ligase family protein [Candidatus Uhrbacteria bacterium] diamond 792 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium
31098806 31098806 PRJNA924320_S_NODE_43595_length_171_cov_1.114754_g43453_i0 PRJNA924320 43595 171 1.114754 1.90622934 Candidatus Uhrbacteria bacterium 2053634 Bacteria Bacteria 64.3 3.36e-10   NR MEI7512488.1 2053634 g43453 i0 60 10.6315789473684 50 20 87.7 0 6 155 165 214 MEI7512488.1 RecQ family ATP-dependent DNA helicase [Candidatus Uhrbacteria bacterium] diamond 1818 64.3 1 Bacteria Bacteria candidate phyla   Candidatus Uhriibacteriota         Candidatus Uhrbacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;