RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA924320" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA924320 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27656754 27656754 PRJNA924320_S_NODE_47344_length_166_cov_1.974359_g47202_i0 PRJNA924320 47344 166 1.974359 3.27743594 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 47 4.26e-4   NR MFC1713122.1 2026781 g47202 i0 50 0.759036144578313 42 21 75.9 0 166 41 273 314 MFC1713122.1 metallophosphoesterase [Candidatus Poribacteria bacterium] diamond 126 47 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
28635586 28635586 PRJNA924320_S_NODE_16027_length_253_cov_1.750000_g15885_i0 PRJNA924320 16027 253 1.75 4.4275 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 45.1 0.00654   NR MAT78319.1 2026781 g15885 i0 37.9 0.687747035573123 58 31 62.8 1 228 70 525 582 MAT78319.1 hypothetical protein [Candidatus Poribacteria bacterium] diamond 174 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30593308 30593308 PRJNA924320_S_NODE_17873_length_242_cov_1.663212_g17731_i0 PRJNA924320 17873 242 1.663212 4.02497304 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 53.5 5.56e-6   NR MYF98068.1 2026781 g17731 i0 39.3 2.08264462809917 56 34 69.4 0 239 72 204 259 MYF98068.1 serpin family protein [Candidatus Poribacteria bacterium] diamond 504 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;