contig_metadata
53 rows where analysis = "diamond", bioproject = "PRJNA922890" and tax_phylum = "Pseudomonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2174035 | 2174035 | PRJNA922890_P_NODE_77662_length_231_cov_0.888889_g77252_i0 | PRJNA922890 | 77662 | 231 | 0.888889 | 2.05333359 | Alphaproteobacteria | 28211 | Bacteria | Bacteria | 110 | 8.43e-30 | NR | WP_054362432.1 | 28211 | g77252 | i0 | 100 | 0.701298701298701 | 54 | 0 | 70.1 | 0 | 3 | 164 | 24 | 77 | WP_054362432.1 MULTISPECIES: DUF2274 domain-containing protein [Alphaproteobacteria] | diamond | 162 | 110 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | ||||||
| 3449128 | 3449128 | PRJNA922890_P_NODE_55023_length_263_cov_1.917526_g54613_i0 | PRJNA922890 | 55023 | 263 | 1.917526 | 5.04309338 | Burkholderiales | 80840 | Bacteria | Bacteria | 172 | 1.5599999999999994e-48 | NR | MEE8617424.1 | 1971397 | g54613 | i0 | 100 | 2.97718631178707 | 87 | 0 | 99.2 | 0 | 1 | 261 | 346 | 432 | MEE8617424.1 ATP-binding protein [Roseateles sp.] | diamond | 783 | 172 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles sp. | ||
| 4726918 | 4726918 | PRJNA922890_P_NODE_62604_length_246_cov_1.237288_g62194_i0 | PRJNA922890 | 62604 | 246 | 1.237288 | 3.04372848 | Lysobacteraceae bacterium | 1926873 | Bacteria | Bacteria | 149 | 1.32e-41 | NR | MBA4285618.1 | 1926873 | g62194 | i0 | 87.7 | 0.98780487804878 | 81 | 10 | 98.8 | 0 | 3 | 245 | 202 | 282 | MBA4285618.1 phytoene synthase [Lysobacteraceae bacterium] | diamond | 243 | 149 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Lysobacteraceae bacterium | |||
| 5080385 | 5080385 | PRJNA922890_P_NODE_80424_length_229_cov_1.550000_g80014_i0 | PRJNA922890 | 80424 | 229 | 1.55 | 3.5495 | Nevskia sp. | 1929292 | Bacteria | Bacteria | 75.5 | 7.23e-15 | NR | MDP3295073.1 | 1929292 | g80014 | i0 | 56.9 | 0.943231441048035 | 72 | 31 | 94.3 | 0 | 6 | 221 | 23 | 94 | MDP3295073.1 A24 family peptidase [Nevskia sp.] | diamond | 216 | 75.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Nevskia | Nevskia sp. | ||
| 10180669 | 10180669 | PRJNA922890_P_NODE_72768_length_233_cov_0.890244_g72358_i0 | PRJNA922890 | 72768 | 233 | 0.890244 | 2.07426852 | Sphingomonas sp. PL2 | 28214 | Bacteria | Bacteria | 150 | 2.0299999999999993e-43 | NR | WP_209611107.1 | 2760712 | g72358 | i0 | 100 | 0.991416309012876 | 77 | 0 | 99.1 | 0 | 2 | 232 | 117 | 193 | WP_209611107.1 response regulator [Sphingomonas sp. PL20] | diamond | 231 | 150 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. PL20 | ||
| 14005968 | 14005968 | PRJNA922890_P_NODE_54091_length_266_cov_1.020305_g53681_i0 | PRJNA922890 | 54091 | 266 | 1.020305 | 2.7140113 | Tatlockia sp. | 2740535 | Bacteria | Bacteria | 191 | 2.82e-60 | NR | MBA2749677.1 | 2740535 | g53681 | i0 | 98.9 | 0.992481203007519 | 88 | 1 | 99.2 | 0 | 2 | 265 | 29 | 116 | MBA2749677.1 photosystem I core protein PsaA [Tatlockia sp.] | diamond | 264 | 191 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Legionellales | Legionellaceae | Tatlockia | Tatlockia sp. | ||
| 16201429 | 16201429 | PRJNA922890_P_NODE_66533_length_237_cov_1.636905_g66123_i0 | PRJNA922890 | 66533 | 237 | 1.636905 | 3.87946485 | Lysobacteraceae | 32033 | Bacteria | Bacteria | 114 | 1.7e-29 | NR | HSM10261.1 | 72226 | g66123 | i0 | 73.7 | 6.84810126582278 | 76 | 20 | 96.2 | 0 | 236 | 9 | 2 | 77 | HSM10261.1 sulfite exporter TauE/SafE family protein [Lysobacter sp.] | diamond | 1623 | 115 | 0.991304347826087 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Lysobacter | Lysobacter sp. | ||
| 16201567 | 16201567 | PRJNA922890_P_NODE_74013_length_233_cov_0.878049_g73603_i0 | PRJNA922890 | 74013 | 233 | 0.878049 | 2.04585417 | Sphingomonas sp. | 28214 | Bacteria | Bacteria | 150 | 8.9e-41 | NR | WP_372890757.1 | 28214 | g73603 | i0 | 94.8 | 0.991416309012876 | 77 | 4 | 99.1 | 0 | 2 | 232 | 489 | 565 | WP_372890757.1 aminodeoxychorismate synthase component I [Sphingomonas sp.] | diamond | 231 | 150 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. | ||
| 17476981 | 17476981 | PRJNA922890_P_NODE_83614_length_228_cov_0.905660_g83204_i0 | PRJNA922890 | 83614 | 228 | 0.90566 | 2.0649048 | Minwuiales bacterium | 2892947 | Bacteria | Bacteria | 112 | 4.06e-30 | NR | MCG8695880.1 | 2892947 | g83204 | i0 | 73.2 | 0.934210526315789 | 71 | 18 | 93.4 | 1 | 2 | 214 | 57 | 126 | MCG8695880.1 cytochrome c family protein [Minwuiales bacterium] | diamond | 213 | 112 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Minwuiales | Minwuiales bacterium | ||||
| 20025261 | 20025261 | PRJNA922890_P_NODE_71556_length_234_cov_0.872727_g71146_i0 | PRJNA922890 | 71556 | 234 | 0.872727 | 2.04218118 | Pseudomonas fluorescens | 294 | Bacteria | Bacteria | 95.5 | 1.47e-23 | NR | KWV84780.1 | 294 | g71146 | i0 | 100 | 0.525641025641026 | 41 | 0 | 52.6 | 0 | 2 | 124 | 60 | 100 | KWV84780.1 hypothetical protein PFLmoz3_05818 [Pseudomonas fluorescens] | diamond | 123 | 95.5 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas fluorescens | ||
| 21300771 | 21300771 | PRJNA922890_P_NODE_82757_length_228_cov_0.918239_g82347_i0 | PRJNA922890 | 82757 | 228 | 0.918239 | 2.09358492 | Aquabacterium sp. | 1872578 | Bacteria | Bacteria | 115 | 4.67e-31 | NR | WP_374320238.1 | 1872578 | g82347 | i0 | 89.1 | 0.842105263157895 | 64 | 7 | 84.2 | 0 | 193 | 2 | 1 | 64 | WP_374320238.1 hypothetical protein [Aquabacterium sp.] | diamond | 192 | 115 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Aquabacterium | Aquabacterium sp. | |||
| 21654115 | 21654115 | PRJNA922890_P_NODE_34377_length_327_cov_1.953488_g33967_i0 | PRJNA922890 | 34377 | 327 | 1.953488 | 6.38790576 | Bacteria | 2 | Bacteria | Bacteria | 219 | 5.5799999999999996e-67 | NR | WP_171921453.1 | 562 | g33967 | i0 | 99.1 | 3.96330275229358 | 108 | 1 | 99.1 | 0 | 325 | 2 | 41 | 148 | WP_171921453.1 DNA ligase [Escherichia coli] | diamond | 1296 | 221 | 0.990950226244344 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 25124709 | 25124709 | PRJNA922890_P_NODE_76860_length_231_cov_0.901235_g76450_i0 | PRJNA922890 | 76860 | 231 | 0.901235 | 2.08185285 | Brucella intermedia | 94625 | Bacteria | Bacteria | 142 | 6.31e-39 | NR | WP_253126688.1 | 94625 | g76450 | i0 | 89.5 | 3.94805194805195 | 76 | 8 | 98.7 | 0 | 2 | 229 | 217 | 292 | WP_253126688.1 plasmid partitioning protein RepA [Brucella intermedia] | diamond | 912 | 142 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Hyphomicrobiales | Brucellaceae | Brucella | Brucella intermedia | ||
| 27024625 | 27024625 | PRJNA922890_P_NODE_72082_length_234_cov_0.872727_g71672_i0 | PRJNA922890 | 72082 | 234 | 0.872727 | 2.04218118 | Hydrogenophaga sp. | 1904254 | Bacteria | Bacteria | 139 | 2.59e-36 | NR | WP_332751192.1 | 1904254 | g71672 | i0 | 83.1 | 0.987179487179487 | 77 | 13 | 98.7 | 0 | 3 | 233 | 579 | 655 | WP_332751192.1 BREX system Lon protease-like protein BrxL [Hydrogenophaga sp.] | diamond | 231 | 139 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Comamonadaceae | Hydrogenophaga | Hydrogenophaga sp. | ||
| 27277659 | 27277659 | PRJNA922890_P_NODE_13843_length_513_cov_15.387387_g13436_i0 | PRJNA922890 | 13843 | 513 | 15.387387 | 78.93729531 | Herbaspirillum rubrisubalbicans | 80842 | Bacteria | Bacteria | 120 | 7.76e-32 | NR | WP_237742021.1 | 80842 | g13436 | i0 | 71 | 0.543859649122807 | 93 | 18 | 52 | 3 | 219 | 485 | 21 | 108 | WP_237742021.1 hypothetical protein, partial [Herbaspirillum rubrisubalbicans] | diamond | 279 | 120 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum rubrisubalbicans | ||
| 27593549 | 27593549 | PRJNA922890_P_NODE_30544_length_346_cov_0.888087_g30134_i0 | PRJNA922890 | 30544 | 346 | 0.888087 | 3.07278102 | Pseudomonas syringae group genomosp. 7 | 251699 | Bacteria | Bacteria | 45.8 | 0.0016 | NR | WP_395588048.1 | 251699 | g30134 | i0 | 36.5 | 0.736994219653179 | 85 | 40 | 73.7 | 5 | 17 | 271 | 19 | 89 | WP_395588048.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7] | diamond | 255 | 45.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas syringae group genomosp. 7 | ||
| 27972258 | 27972258 | PRJNA922890_P_NODE_70125_length_235_cov_0.867470_g69715_i0 | PRJNA922890 | 70125 | 235 | 0.86747 | 2.0385545 | Paraburkholderia franconis | 2654983 | Bacteria | Bacteria | 68.9 | 3.22e-13 | NR | WP_152756877.1 | 2654983 | g69715 | i0 | 59.6 | 0.663829787234043 | 52 | 21 | 66.4 | 0 | 191 | 36 | 6 | 57 | WP_152756877.1 hypothetical protein [Paraburkholderia franconis] | diamond | 156 | 68.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Paraburkholderia | Paraburkholderia franconis | ||
| 28256277 | 28256277 | PRJNA922890_P_NODE_73226_length_233_cov_0.890244_g72816_i0 | PRJNA922890 | 73226 | 233 | 0.890244 | 2.07426852 | Escherichia coli | 562 | Bacteria | Bacteria | 135 | 3.52e-35 | NR | WP_337456029.1 | 562 | g72816 | i0 | 81.3 | 0.965665236051502 | 75 | 14 | 96.6 | 0 | 7 | 231 | 246 | 320 | WP_337456029.1 retrotransposon gag family protein, partial [Escherichia coli] | diamond | 225 | 135 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 28287829 | 28287829 | PRJNA922890_P_NODE_72446_length_233_cov_1.725610_g72036_i0 | PRJNA922890 | 72446 | 233 | 1.72561 | 4.0206713 | Nitrosomonas europaea | 915 | Bacteria | Bacteria | 41.6 | 0.0355 | NR | WP_347888292.1 | 915 | g72036 | i0 | 45.7 | 0.450643776824034 | 35 | 19 | 45.1 | 0 | 150 | 46 | 12 | 46 | WP_347888292.1 hypothetical protein [Nitrosomonas europaea] | diamond | 105 | 41.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Nitrosomonadales | Nitrosomonadaceae | Nitrosomonas | Nitrosomonas europaea | ||
| 28484745 | 28484745 | PRJNA922890_P_NODE_80006_length_230_cov_0.894410_g79596_i0 | PRJNA922890 | 80006 | 230 | 0.89441 | 2.057143 | Burkholderiales | 80840 | Bacteria | Bacteria | 150 | 3.0499999999999993e-40 | NR | WP_175145475.1 | 72557 | g79596 | i0 | 93.4 | 5.94782608695652 | 76 | 5 | 99.1 | 0 | 228 | 1 | 449 | 524 | WP_175145475.1 DEAD/DEAH box helicase [Achromobacter ruhlandii] | diamond | 1368 | 150 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Achromobacter | Achromobacter ruhlandii | ||
| 29077501 | 29077501 | PRJNA922890_P_NODE_79928_length_230_cov_0.894410_g79518_i0 | PRJNA922890 | 79928 | 230 | 0.89441 | 2.057143 | Pseudomonas | 286 | Bacteria | Bacteria | 146 | 5.69e-39 | NR | WP_044308077.1 | 286 | g79518 | i0 | 98.7 | 0.991304347826087 | 76 | 1 | 99.1 | 0 | 230 | 3 | 416 | 491 | WP_044308077.1 MULTISPECIES: caspase family protein [Pseudomonas] | diamond | 228 | 146 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | |||
| 29337256 | 29337256 | PRJNA922890_P_NODE_63009_length_245_cov_1.369318_g62599_i0 | PRJNA922890 | 63009 | 245 | 1.369318 | 3.3548291 | Pseudomonas | 286 | Bacteria | Bacteria | 79.3 | 2.78e-15 | NR | WP_057410434.1 | 136849 | g62599 | i0 | 48.2 | 11.9265306122449 | 83 | 41 | 99.2 | 1 | 3 | 245 | 153 | 235 | WP_057410434.1 MULTISPECIES: PD-(D/E)XK motif protein [Pseudomonas syringae group] | diamond | 2922 | 80.1 | 0.990012484394507 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | |||
| 29393215 | 29393215 | PRJNA922890_P_NODE_50469_length_274_cov_2.517073_g50059_i0 | PRJNA922890 | 50469 | 274 | 2.517073 | 6.89678002 | Paracoccus marinus | 288426 | Bacteria | Bacteria | 76.6 | 2.18e-14 | NR | WP_131675071.1 | 288426 | g50059 | i0 | 98.6 | 0.799270072992701 | 73 | 1 | 79.9 | 0 | 38 | 256 | 1 | 73 | WP_131675071.1 PRC-barrel domain-containing protein [Paracoccus marinus] | diamond | 219 | 76.6 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus marinus | ||
| 29393216 | 29393216 | PRJNA922890_P_NODE_61669_length_248_cov_1.357542_g61259_i0 | PRJNA922890 | 61669 | 248 | 1.357542 | 3.36670416 | Tatlockia sp. | 2740535 | Bacteria | Bacteria | 97.4 | 9.38e-23 | NR | MBA2747908.1 | 2740535 | g61259 | i0 | 66.7 | 0.979838709677419 | 81 | 27 | 98 | 0 | 3 | 245 | 115 | 195 | MBA2747908.1 hypothetical protein [Tatlockia sp.] | diamond | 243 | 97.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Legionellales | Legionellaceae | Tatlockia | Tatlockia sp. | ||
| 29589468 | 29589468 | PRJNA922890_P_NODE_71970_length_234_cov_0.872727_g71560_i0 | PRJNA922890 | 71970 | 234 | 0.872727 | 2.04218118 | Pseudomonadota | 1224 | Bacteria | Bacteria | 135 | 1.94e-39 | NR | WP_204315363.1 | 40324 | g71560 | i0 | 100 | 1.79487179487179 | 70 | 0 | 89.7 | 0 | 25 | 234 | 2 | 71 | WP_204315363.1 hypothetical protein, partial [Stenotrophomonas maltophilia] | diamond | 420 | 135 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Lysobacterales | Lysobacteraceae | Stenotrophomonas | Stenotrophomonas maltophilia | ||
| 29676920 | 29676920 | PRJNA922890_P_NODE_19230_length_435_cov_1.890710_g18820_i0 | PRJNA922890 | 19230 | 435 | 1.89071 | 8.2245885 | Nevskia sp. | 1929292 | Bacteria | Bacteria | 245 | 1.25e-76 | NR | WP_293374061.1 | 1929292 | g18820 | i0 | 87 | 0.903448275862069 | 131 | 17 | 90.3 | 0 | 393 | 1 | 1 | 131 | WP_293374061.1 fatty acid desaturase [Nevskia sp.] | diamond | 393 | 245 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Nevskia | Nevskia sp. | ||
| 29676921 | 29676921 | PRJNA922890_P_NODE_61470_length_248_cov_2.893855_g61060_i0 | PRJNA922890 | 61470 | 248 | 2.893855 | 7.1767604 | Yoonia tamlensis | 390270 | Bacteria | Bacteria | 85.1 | 3.8e-17 | NR | WP_090201854.1 | 390270 | g61060 | i0 | 50 | 0.919354838709677 | 76 | 38 | 91.9 | 0 | 231 | 4 | 33 | 108 | WP_090201854.1 protein rep [Yoonia tamlensis] | diamond | 228 | 85.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Yoonia | Yoonia tamlensis | ||
| 29803473 | 29803473 | PRJNA922890_P_NODE_42691_length_297_cov_1.921053_g42281_i0 | PRJNA922890 | 42691 | 297 | 1.921053 | 5.70552741 | Herbaspirillum rubrisubalbicans | 80842 | Bacteria | Bacteria | 163 | 3.74e-50 | NR | WP_146744654.1 | 80842 | g42281 | i0 | 95.4 | 0.878787878787879 | 87 | 4 | 87.9 | 0 | 290 | 30 | 3 | 89 | WP_146744654.1 hypothetical protein, partial [Herbaspirillum rubrisubalbicans] | diamond | 261 | 163 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum rubrisubalbicans | ||
| 30087794 | 30087794 | PRJNA922890_P_NODE_57632_length_257_cov_2.367021_g57222_i0 | PRJNA922890 | 57632 | 257 | 2.367021 | 6.08324397 | Burkholderiales bacterium RIFCSPHIGHO2_ | 1891238 | Bacteria | Bacteria | 167 | 1.4899999999999999e-47 | NR | OGA82493.1 | 1797552 | g57222 | i0 | 95.3 | 0.992217898832685 | 85 | 4 | 99.2 | 0 | 256 | 2 | 94 | 178 | OGA82493.1 MAG: hypothetical protein A2711_15745 [Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240] | diamond | 255 | 167 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240 | ||||
| 30214129 | 30214129 | PRJNA922890_P_NODE_73592_length_233_cov_0.878049_g73182_i0 | PRJNA922890 | 73592 | 233 | 0.878049 | 2.04585417 | Citromicrobium sp. | 2024827 | Bacteria | Bacteria | 117 | 1.77e-32 | NR | PZU17080.1 | 2024827 | g73182 | i0 | 100 | 0.708154506437768 | 55 | 0 | 70.8 | 0 | 1 | 165 | 27 | 81 | PZU17080.1 MAG: hypothetical protein DI591_04155 [Citromicrobium sp.] | diamond | 165 | 117 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Citromicrobium | Citromicrobium sp. | ||
| 30285097 | 30285097 | PRJNA922890_P_NODE_57852_length_257_cov_1.319149_g57442_i0 | PRJNA922890 | 57852 | 257 | 1.319149 | 3.39021293 | Sphaerotilaceae | 2975441 | Bacteria | Bacteria | 42.7 | 0.043 | NR | WP_240668292.1 | 1796922 | g57442 | i0 | 42.1 | 1.77431906614786 | 76 | 34 | 77 | 4 | 220 | 23 | 287 | 362 | WP_240668292.1 BCD family MFS transporter [Piscinibacter defluvii] | diamond | 456 | 43.1 | 0.990719257540603 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Piscinibacter | Piscinibacter defluvii | ||
| 30467341 | 30467341 | PRJNA922890_P_NODE_70233_length_235_cov_0.867470_g69823_i0 | PRJNA922890 | 70233 | 235 | 0.86747 | 2.0385545 | Roseateles puraquae | 431059 | Bacteria | Bacteria | 156 | 1.0600000000000001e-44 | NR | WP_088483614.1 | 431059 | g69823 | i0 | 100 | 0.982978723404255 | 77 | 0 | 98.3 | 0 | 233 | 3 | 64 | 140 | WP_088483614.1 glycosyltransferase [Roseateles puraquae] | diamond | 231 | 156 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Roseateles | Roseateles puraquae | ||
| 30530117 | 30530117 | PRJNA922890_P_NODE_65973_length_238_cov_2.035503_g65563_i0 | PRJNA922890 | 65973 | 238 | 2.035503 | 4.84449714 | uncultured Sphingomonas sp. | 158754 | Bacteria | Bacteria | 94.4 | 3.36e-23 | NR | WP_294324019.1 | 158754 | g65563 | i0 | 76.3 | 1.48739495798319 | 59 | 14 | 74.4 | 0 | 2 | 178 | 31 | 89 | WP_294324019.1 hypothetical protein [uncultured Sphingomonas sp.] | diamond | 354 | 94.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | uncultured Sphingomonas sp. | ||
| 30751438 | 30751438 | PRJNA922890_P_NODE_51214_length_273_cov_1.004902_g50804_i0 | PRJNA922890 | 51214 | 273 | 1.004902 | 2.74338246 | Pseudomonadota bacterium | 1977087 | Bacteria | Bacteria | 105 | 8.4e-27 | NR | MEL6702586.1 | 1977087 | g50804 | i0 | 62.3 | 0.846153846153846 | 77 | 29 | 84.6 | 0 | 233 | 3 | 1 | 77 | MEL6702586.1 uL14 family ribosomal protein [Pseudomonadota bacterium] | diamond | 231 | 105 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Pseudomonadota bacterium | ||||||
| 30782952 | 30782952 | PRJNA922890_P_NODE_59114_length_254_cov_1.281081_g58704_i0 | PRJNA922890 | 59114 | 254 | 1.281081 | 3.25394574 | Nevskia ramosa | 64002 | Bacteria | Bacteria | 43.1 | 0.029 | NR | WP_022977981.1 | 64002 | g58704 | i0 | 71.4 | 0.330708661417323 | 28 | 8 | 33.1 | 0 | 142 | 225 | 62 | 89 | WP_022977981.1 hypothetical protein [Nevskia ramosa] | diamond | 84 | 43.1 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Nevskiales | Nevskiaceae | Nevskia | Nevskia ramosa | ||
| 30853398 | 30853398 | PRJNA922890_P_NODE_83974_length_228_cov_0.905660_g83564_i0 | PRJNA922890 | 83974 | 228 | 0.90566 | 2.0649048 | Sphingomonas | 13687 | Bacteria | Bacteria | 137 | 6.67e-38 | NR | WP_353447155.1 | 185951 | g83564 | i0 | 82.7 | 7.84210526315789 | 75 | 13 | 98.7 | 0 | 2 | 226 | 182 | 256 | WP_353447155.1 3'-5' exonuclease [Sphingomonas aerolata] | diamond | 1788 | 137 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas aerolata | ||
| 30941148 | 30941148 | PRJNA922890_P_NODE_54414_length_265_cov_1.137755_g54004_i0 | PRJNA922890 | 54414 | 265 | 1.137755 | 3.01505075 | Aquabacterium commune | 70586 | Bacteria | Bacteria | 89.7 | 2.82e-19 | NR | WP_133610261.1 | 70586 | g54004 | i0 | 69.2 | 0.735849056603774 | 65 | 17 | 70.2 | 1 | 79 | 264 | 7 | 71 | WP_133610261.1 MipA/OmpV family protein [Aquabacterium commune] | diamond | 195 | 89.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Aquabacterium | Aquabacterium commune | |||
| 30941149 | 30941149 | PRJNA922890_P_NODE_54834_length_264_cov_1.189744_g54424_i0 | PRJNA922890 | 54834 | 264 | 1.189744 | 3.14092416 | Sphingomonas sanguinis | 33051 | Bacteria | Bacteria | 137 | 2.04e-36 | NR | WP_058732211.1 | 33051 | g54424 | i0 | 77 | 0.988636363636364 | 87 | 20 | 98.9 | 0 | 2 | 262 | 342 | 428 | WP_058732211.1 helix-turn-helix domain-containing protein [Sphingomonas sanguinis] | diamond | 261 | 137 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sanguinis | ||
| 31036041 | 31036041 | PRJNA922890_P_NODE_16095_length_476_cov_11.459459_g15685_i0 | PRJNA922890 | 16095 | 476 | 11.459459 | 54.54702484 | Herbaspirillum rubrisubalbicans | 80842 | Bacteria | Bacteria | 105 | 5.830000000000001e-26 | NR | WP_237742021.1 | 80842 | g15685 | i0 | 71.1 | 0.523109243697479 | 83 | 20 | 52.3 | 1 | 200 | 448 | 30 | 108 | WP_237742021.1 hypothetical protein, partial [Herbaspirillum rubrisubalbicans] | diamond | 249 | 105 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Herbaspirillum | Herbaspirillum rubrisubalbicans | ||
| 31731263 | 31731263 | PRJNA922890_P_NODE_74097_length_233_cov_0.878049_g73687_i0 | PRJNA922890 | 74097 | 233 | 0.878049 | 2.04585417 | unclassified Sphingomonas | 196159 | Bacteria | Bacteria | 146 | 4.35e-43 | NR | WP_033964613.1 | 196159 | g73687 | i0 | 97.4 | 0.991416309012876 | 77 | 2 | 99.1 | 0 | 231 | 1 | 8 | 84 | WP_033964613.1 MULTISPECIES: molybdenum cofactor biosynthesis protein MoaE [unclassified Sphingomonas] | diamond | 231 | 146 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | |||
| 31770261 | 31770261 | PRJNA922890_P_NODE_27337_length_364_cov_2.172881_g26927_i0 | PRJNA922890 | 27337 | 364 | 2.172881 | 7.90928684 | Bacteria | 2 | Bacteria | Bacteria | 230 | 2.3299999999999996e-73 | NR | MEW0208973.1 | 562 | g26927 | i0 | 100 | 4.45054945054945 | 108 | 0 | 89 | 0 | 362 | 39 | 203 | 310 | MEW0208973.1 hypothetical protein [Escherichia coli] | diamond | 1620 | 230 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Escherichia | Escherichia coli | ||
| 31826134 | 31826134 | PRJNA922890_P_NODE_82177_length_229_cov_0.900000_g81767_i0 | PRJNA922890 | 82177 | 229 | 0.9 | 2.061 | Pseudaquabacterium inlustre | 2984192 | Bacteria | Bacteria | 138 | 8.59e-36 | NR | WP_341408764.1 | 2984192 | g81767 | i0 | 92.1 | 0.995633187772926 | 76 | 6 | 99.6 | 0 | 2 | 229 | 250 | 325 | WP_341408764.1 LuxR C-terminal-related transcriptional regulator [Pseudaquabacterium inlustre] | diamond | 228 | 138 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Sphaerotilaceae | Pseudaquabacterium | Pseudaquabacterium inlustre | ||
| 31952757 | 31952757 | PRJNA922890_P_NODE_73097_length_233_cov_0.890244_g72687_i0 | PRJNA922890 | 73097 | 233 | 0.890244 | 2.07426852 | Pseudomonas sp. YQ_5 | 3367229 | Bacteria | Bacteria | 93.2 | 3.54e-20 | NR | WP_392521785.1 | 3367229 | g72687 | i0 | 64.1 | 1.00429184549356 | 78 | 25 | 99.1 | 3 | 1 | 231 | 59 | 134 | WP_392521785.1 hypothetical protein [Pseudomonas sp. YQ_5] | diamond | 234 | 93.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | Pseudomonas sp. YQ_5 | ||
| 31952758 | 31952758 | PRJNA922890_P_NODE_77597_length_231_cov_0.888889_g77187_i0 | PRJNA922890 | 77597 | 231 | 0.888889 | 2.05333359 | Stutzerimonas stutzeri | 316 | Bacteria | Bacteria | 125 | 3.4799999999999993e-31 | NR | WP_301947832.1 | 316 | g77187 | i0 | 71.4 | 1 | 77 | 22 | 100 | 0 | 231 | 1 | 538 | 614 | WP_301947832.1 hypothetical protein [Stutzerimonas stutzeri] | diamond | 231 | 125 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Stutzerimonas | Stutzerimonas stutzeri | ||
| 31984407 | 31984407 | PRJNA922890_P_NODE_73938_length_233_cov_0.878049_g73528_i0 | PRJNA922890 | 73938 | 233 | 0.878049 | 2.04585417 | Gammaproteobacteria bacterium | 1913989 | Bacteria | Bacteria | 92 | 8.71e-20 | NR | MCX7070172.1 | 1913989 | g73528 | i0 | 94.8 | 0.746781115879828 | 58 | 3 | 74.7 | 0 | 180 | 7 | 1 | 58 | MCX7070172.1 efflux RND transporter periplasmic adaptor subunit [Gammaproteobacteria bacterium] | diamond | 174 | 92 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Gammaproteobacteria bacterium | |||||
| 32142762 | 32142762 | PRJNA922890_P_NODE_59978_length_252_cov_1.415301_g59568_i0 | PRJNA922890 | 59978 | 252 | 1.415301 | 3.56655852 | Enterobacter hormaechei | 158836 | Bacteria | Bacteria | 176 | 3.6799999999999996e-54 | NR | WP_149415409.1 | 158836 | g59568 | i0 | 97.6 | 36.5357142857143 | 83 | 2 | 98.8 | 0 | 250 | 2 | 89 | 171 | WP_149415409.1 WD40 repeat domain-containing protein, partial [Enterobacter hormaechei] | diamond | 9207 | 176 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Enterobacter | Enterobacter hormaechei | ||
| 32308471 | 32308471 | PRJNA922890_P_NODE_70099_length_235_cov_0.867470_g69689_i0 | PRJNA922890 | 70099 | 235 | 0.86747 | 2.0385545 | Sphingomonas | 13687 | Bacteria | Bacteria | 106 | 1.89e-26 | NR | WP_010404681.1 | 59803 | g69689 | i0 | 98.2 | 2.1063829787234 | 55 | 1 | 70.2 | 0 | 165 | 1 | 1 | 55 | WP_010404681.1 flagellar biosynthetic protein FliO [Sphingomonas echinoides] | diamond | 495 | 107 | 0.990654205607477 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas echinoides | ||
| 32490919 | 32490919 | PRJNA922890_P_NODE_71699_length_234_cov_0.872727_g71289_i0 | PRJNA922890 | 71699 | 234 | 0.872727 | 2.04218118 | Yoonia tamlensis | 390270 | Bacteria | Bacteria | 78.2 | 9.88e-15 | NR | WP_090201854.1 | 390270 | g71289 | i0 | 55.7 | 1.01282051282051 | 79 | 34 | 100 | 1 | 1 | 234 | 107 | 185 | WP_090201854.1 protein rep [Yoonia tamlensis] | diamond | 237 | 78.2 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Yoonia | Yoonia tamlensis | ||
| 32522682 | 32522682 | PRJNA922890_P_NODE_69939_length_235_cov_0.867470_g69529_i0 | PRJNA922890 | 69939 | 235 | 0.86747 | 2.0385545 | Sphingomonas echinoides | 59803 | Bacteria | Bacteria | 142 | 3.64e-37 | NR | WP_010406684.1 | 59803 | g69529 | i0 | 97.4 | 0.982978723404255 | 77 | 2 | 98.3 | 0 | 233 | 3 | 288 | 364 | WP_010406684.1 VirB4 family type IV secretion/conjugal transfer ATPase [Sphingomonas echinoides] | diamond | 231 | 142 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas echinoides | ||
| 32617068 | 32617068 | PRJNA922890_P_NODE_71300_length_234_cov_0.884848_g70890_i0 | PRJNA922890 | 71300 | 234 | 0.884848 | 2.07054432 | Steroidobacteraceae bacterium | 2689616 | Bacteria | Bacteria | 42.7 | 0.0323 | NR | HUA89878.1 | 2689616 | g70890 | i0 | 60.7 | 0.358974358974359 | 28 | 11 | 35.9 | 0 | 26 | 109 | 11 | 38 | HUA89878.1 TolC family protein [Steroidobacteraceae bacterium] | diamond | 84 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Steroidobacterales | Steroidobacteraceae | Steroidobacteraceae bacterium | |||
| 32743140 | 32743140 | PRJNA922890_P_NODE_84340_length_226_cov_2.286624_g83930_i0 | PRJNA922890 | 84340 | 226 | 2.286624 | 5.16777024 | Zoogloea dura | 2728840 | Bacteria | Bacteria | 154 | 1.6799999999999996e-43 | NR | WP_169146596.1 | 2728840 | g83930 | i0 | 95.9 | 0.982300884955752 | 74 | 3 | 98.2 | 0 | 224 | 3 | 195 | 268 | WP_169146596.1 porin [Zoogloea dura] | diamond | 222 | 154 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Rhodocyclales | Zoogloeaceae | Zoogloea | Zoogloea dura | ||
| 32774375 | 32774375 | PRJNA922890_P_NODE_78020_length_231_cov_0.888889_g77610_i0 | PRJNA922890 | 78020 | 231 | 0.888889 | 2.05333359 | Sphingomonas sp. TF3 | 2495580 | Bacteria | Bacteria | 123 | 8.95e-31 | NR | WP_126845708.1 | 2495580 | g77610 | i0 | 98.5 | 0.844155844155844 | 65 | 1 | 84.4 | 0 | 35 | 229 | 357 | 421 | WP_126845708.1 DUF4153 domain-containing protein [Sphingomonas sp. TF3] | diamond | 195 | 123 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Sphingomonadales | Sphingomonadaceae | Sphingomonas | Sphingomonas sp. TF3 | ||
| 32837382 | 32837382 | PRJNA922890_P_NODE_60020_length_252_cov_1.218579_g59610_i0 | PRJNA922890 | 60020 | 252 | 1.218579 | 3.07081908 | Rhodobacteraceae bacterium GWE1_64_9 | 1802012 | Bacteria | Bacteria | 165 | 7.34e-50 | NR | OHC46272.1 | 1802012 | g59610 | i0 | 97.6 | 1 | 84 | 2 | 100 | 0 | 252 | 1 | 113 | 196 | OHC46272.1 MAG: electron transport protein SCO1/SenC [Rhodobacteraceae bacterium GWE1_64_9] | diamond | 252 | 165 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Rhodobacteraceae bacterium GWE1_64_9 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;