RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA922890" and tax_phylum = "Evosea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Evosea · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA922890 · 15 ✖

analysis 1

  • diamond · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3449150 3449150 PRJNA922890_P_NODE_56523_length_260_cov_1.387435_g56113_i0 PRJNA922890 56523 260 1.387435 3.607331 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 87 6.91e-19   NR PRP85435.1 1890364 g56113 i0 58.1 0.992307692307692 86 35 99.2 1 260 3 91 175 PRP85435.1 component of cytosolic 80S ribosome and 40S small subunit [Planoprotostelium fungivorum] diamond 258 87 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
14926595 14926595 PRJNA922890_P_NODE_75612_length_232_cov_0.883436_g75202_i0 PRJNA922890 75612 232 0.883436 2.04957152 Eumycetozoa 142796 Evosea other_Eukaryota 118 4.87e-29   NR XP_003285685.1 5786 g75202 i0 71.4 5.97413793103448 77 22 99.6 0 1 231 259 335 XP_003285685.1 uncharacterized protein DICPUDRAFT_53740 [Dictyostelium purpureum] diamond 1386 118 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
26676165 26676165 PRJNA922890_P_NODE_75821_length_232_cov_0.883436_g75411_i0 PRJNA922890 75821 232 0.883436 2.04957152 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 89 1.11e-18   NR PRP78298.1 1890364 g75411 i0 63.1 0.84051724137931 65 22 81.5 2 191 3 213 277 PRP78298.1 hypothetical protein PROFUN_13832 [Planoprotostelium fungivorum] diamond 195 89 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26739333 26739333 PRJNA922890_P_NODE_68661_length_235_cov_1.506024_g68251_i0 PRJNA922890 68661 235 1.506024 3.5391564 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 83.6 7.65e-18   NR PRP76965.1 1890364 g68251 i0 70.7 0.740425531914894 58 13 74 2 6 179 74 127 PRP76965.1 hypothetical protein PROFUN_14666 [Planoprotostelium fungivorum] diamond 174 83.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26771483 26771483 PRJNA922890_P_NODE_66581_length_237_cov_1.464286_g66171_i0 PRJNA922890 66581 237 1.464286 3.47035782 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 69.3 1.5e-11   NR XP_012759458.1 1410327 g66171 i0 44.7 0.962025316455696 76 42 96.2 0 9 236 2390 2465 XP_012759458.1 hypothetical protein SAMD00019534_005710 [Acytostelium subglobosum LB1] diamond 228 69.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
28130251 28130251 PRJNA922890_P_NODE_79225_length_230_cov_0.906832_g78815_i0 PRJNA922890 79225 230 0.906832 2.0857136 Polysphondylium violaceum 133409 Evosea other_Eukaryota 75.5 9.19e-14   NR KAF2068463.1 133409 g78815 i0 53.9 1.9695652173913 76 35 99.1 0 228 1 734 809 KAF2068463.1 hypothetical protein CYY_010210 [Polysphondylium violaceum] diamond 453 75.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
28477482 28477482 PRJNA922890_P_NODE_52346_length_270_cov_1.154229_g51936_i0 PRJNA922890 52346 270 1.154229 3.1164183 Heterostelium album PN5 2086695 Evosea other_Eukaryota 79.7 5.29e-15   NR XP_020435067.1 670386 g51936 i0 42.5 1.98888888888889 87 48 94.4 1 16 270 729 815 XP_020435067.1 Ras guanine nucleotide exchange factor [Heterostelium album PN500] diamond 537 79.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
28516362 28516362 PRJNA922890_P_NODE_67907_length_236_cov_0.874251_g67497_i0 PRJNA922890 67907 236 0.874251 2.06323236 Eumycetozoa 142796 Evosea other_Eukaryota 61.6 7.72e-9   NR KAF2076491.1 133409 g67497 i0 61.4 3.35593220338983 44 17 55.9 0 1 132 2196 2239 KAF2076491.1 hypothetical protein CYY_002231 [Polysphondylium violaceum] diamond 792 61.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
28635579 28635579 PRJNA922890_P_NODE_16187_length_475_cov_1.748768_g15777_i0 PRJNA922890 16187 475 1.748768 8.306648 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 167 7.239999999999999e-48   NR KYR02370.1 361077 g15777 i0 59 4.25684210526316 134 54 84 1 399 1 161 294 KYR02370.1 AhpC/TSA family protein [Tieghemostelium lacteum] diamond 2022 167 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30656547 30656547 PRJNA922890_P_NODE_72853_length_233_cov_0.890244_g72443_i0 PRJNA922890 72853 233 0.890244 2.07426852 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 79.7 3.14e-15   NR PRP78340.1 1890364 g72443 i0 57.1 0.991416309012876 77 30 96.6 2 228 4 795 870 PRP78340.1 hypothetical protein PROFUN_11380 [Planoprotostelium fungivorum] diamond 231 79.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31604950 31604950 PRJNA922890_P_NODE_67536_length_236_cov_1.736527_g67126_i0 PRJNA922890 67536 236 1.736527 4.09820372 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 94.4 2.36e-20   NR PRP80037.1 1890364 g67126 i0 59.5 1.00423728813559 79 31 99.2 1 234 1 993 1071 PRP80037.1 WD repeat domain 35-like [Planoprotostelium fungivorum] diamond 237 94.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31984406 31984406 PRJNA922890_P_NODE_38418_length_312_cov_1.152263_g38008_i0 PRJNA922890 38418 312 1.152263 3.59506056 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 122 6.98e-32   NR PRP84553.1 1890364 g38008 i0 68.8 0.894230769230769 93 28 88.5 1 35 310 100 192 PRP84553.1 hypothetical protein PROFUN_05888 [Planoprotostelium fungivorum] diamond 279 122 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32047832 32047832 PRJNA922890_P_NODE_60838_length_250_cov_1.314917_g60428_i0 PRJNA922890 60838 250 1.314917 3.2872925 Cavenderia fasciculata 261658 Evosea other_Eukaryota 125 4.46e-35   NR XP_004362999.1 261658 g60428 i0 81.2 3.312 69 13 82.8 0 43 249 7 75 XP_004362999.1 cytochrome c [Cavenderia fasciculata] diamond 828 125 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
32047834 32047834 PRJNA922890_P_NODE_83878_length_228_cov_0.905660_g83468_i0 PRJNA922890 83878 228 0.90566 2.0649048 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 132 2.22e-36   NR PRP74248.1 1890364 g83468 i0 82.9 1 76 13 100 0 228 1 125 200 PRP74248.1 hypothetical protein PROFUN_11995 [Planoprotostelium fungivorum] diamond 228 132 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32522681 32522681 PRJNA922890_P_NODE_65679_length_239_cov_1.452941_g65269_i0 PRJNA922890 65679 239 1.452941 3.47252899 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 62.4 3.85e-9   NR KYQ91236.1 361077 g65269 i0 69 1.64435146443515 42 13 52.7 0 14 139 264 305 KYQ91236.1 putative protein tyrosine phosphatase [Tieghemostelium lacteum] diamond 393 62.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;