RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA922890" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA922890 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4726834 4726834 PRJNA922890_P_NODE_58164_length_256_cov_1.550802_g57754_i0 PRJNA922890 58164 256 1.550802 3.97005312 Eukaryota 2759 Fungi Fungi 121 4.15e-33   NR XP_006681055.1 684364 g57754 i0 69.4 6.97265625 85 26 99.6 0 255 1 8 92 XP_006681055.1 uncharacterized protein BATDEDRAFT_26800 [Batrachochytrium dendrobatidis JAM81] diamond 1785 122 0.991803278688525 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
18749906 18749906 PRJNA922890_P_NODE_59515_length_253_cov_1.380435_g59105_i0 PRJNA922890 59515 253 1.380435 3.49250055 Boothiomyces sp. JEL 2170262 Fungi Fungi 86.7 1.62e-19   NR KAJ3320525.1 2724215 g59105 i0 56.6 5.58498023715415 76 32 88.9 1 233 9 59 134 KAJ3320525.1 60S ribosomal protein L27 [Boothiomyces sp. JEL0866] diamond 1413 86.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Terramycetaceae Boothiomyces Boothiomyces sp. JEL0866
26961174 26961174 PRJNA922890_P_NODE_78022_length_231_cov_0.888889_g77612_i0 PRJNA922890 78022 231 0.888889 2.05333359 Terramyces sp. JEL 2040976 Fungi Fungi 57 2.65e-7   NR KAJ3275231.1 2724204 g77612 i0 44.7 0.987012987012987 76 36 98.7 2 3 230 205 274 KAJ3275231.1 hypothetical protein HDV01_000957 [Terramyces sp. JEL0728] diamond 228 57 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales Terramycetaceae Terramyces Terramyces sp. JEL0728
27182510 27182510 PRJNA922890_P_NODE_52802_length_269_cov_1.090000_g52392_i0 PRJNA922890 52802 269 1.09 2.9321 Synchytrium endobioticum 286115 Fungi Fungi 119 9.1e-31   NR TPX36054.1 286115 g52392 i0 68.5 1.98513011152416 89 27 98.1 1 265 2 131 219 TPX36054.1 hypothetical protein SeMB42_g07120 [Synchytrium endobioticum] diamond 534 119 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium endobioticum
27537550 27537550 PRJNA922890_P_NODE_60323_length_251_cov_1.582418_g59913_i0 PRJNA922890 60323 251 1.582418 3.97186918 Eukaryota 2759 Fungi Fungi 73.9 1.04e-13   NR TPX40568.1 286115 g59913 i0 50.6 1.9840637450199201 83 40 99.2 1 249 1 141 222 TPX40568.1 hypothetical protein SeMB42_g05942 [Synchytrium endobioticum] diamond 498 73.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium endobioticum
28326683 28326683 PRJNA922890_P_NODE_37866_length_314_cov_1.175510_g37456_i0 PRJNA922890 37866 314 1.17551 3.6911014 Fungi 4751 Fungi Fungi 125 1.15e-34   NR KAJ1568581.1 1604274 g37456 i0 54.2 3.6687898089172 96 44 91.7 0 294 7 1 96 KAJ1568581.1 60S ribosomal protein L27 [Cladochytrium tenue] diamond 1152 125 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium tenue
30568766 30568766 PRJNA922890_P_NODE_60253_length_251_cov_1.730769_g59843_i0 PRJNA922890 60253 251 1.730769 4.34423019 Eukaryota 2759 Fungi Fungi 110 3.42e-28   NR KAI9032102.1 82268 g59843 i0 70.7 3.9203187250996 82 23 98 1 2 247 47 127 KAI9032102.1 ribosomal protein L18e/L15P [Hyaloraphidium curvatum] diamond 984 111 0.990990990990991 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
30695374 30695374 PRJNA922890_P_NODE_79573_length_230_cov_0.894410_g79163_i0 PRJNA922890 79573 230 0.89441 2.057143 Chytridiomycetes 451435 Fungi Fungi 79.3 4.07e-15   NR KAI8808022.1 109936 g79163 i0 46.2 4.0695652173913 78 40 99.1 1 2 229 284 361 KAI8808022.1 armadillo-type protein [Cladochytrium replicatum] diamond 936 79.3 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium replicatum
31604949 31604949 PRJNA922890_P_NODE_26696_length_369_cov_0.960000_g26286_i0 PRJNA922890 26696 369 0.96 3.5424 Cladochytrium tenue 1604274 Fungi Fungi 151 2.02e-44   NR KAJ1568147.1 1604274 g26286 i0 63.1 0.991869918699187 122 45 99.2 0 367 2 4 125 KAJ1568147.1 60S ribosomal protein L32 [Cladochytrium tenue] diamond 366 151 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium tenue

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;