contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJNA922890" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7275844 | 7275844 | PRJNA922890_P_NODE_23946_length_389_cov_1.315625_g23536_i0 | PRJNA922890 | 23946 | 389 | 1.315625 | 5.11778125 | root | 1 | Root_unresolved | Root_unresolved | 63.9 | 4.51e-10 | NR | MFG1541693.1 | 1280 | g23536 | i0 | 44.6 | 2.5681233933162 | 112 | 40 | 76.3 | 4 | 92 | 388 | 1 | 103 | MFG1541693.1 hypothetical protein [Staphylococcus aureus] | diamond | 999 | 64.3 | 0.993779160186625 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus aureus | ||
| 27031834 | 27031834 | PRJNA922890_P_NODE_73002_length_233_cov_0.890244_g72592_i0 | PRJNA922890 | 73002 | 233 | 0.890244 | 2.07426852 | Bacteria | 2 | Bacteria | Bacteria | 42.7 | 0.0298 | NR | MBQ7274017.1 | 1898207 | g72592 | i0 | 41.3 | 1.66094420600858 | 63 | 36 | 81.1 | 1 | 195 | 7 | 10 | 71 | MBQ7274017.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Clostridiales bacterium] | diamond | 387 | 42.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiales bacterium | ||||
| 29550770 | 29550770 | PRJNA922890_P_NODE_81930_length_229_cov_0.900000_g81520_i0 | PRJNA922890 | 81930 | 229 | 0.9 | 2.061 | Paenibacillus sp. 1 | 198340 | Bacteria | Bacteria | 52.4 | 6.36e-6 | NR | WP_119803096.1 | 1675787 | g81520 | i0 | 39.7 | 1.87336244541485 | 73 | 42 | 95.6 | 1 | 225 | 7 | 38 | 108 | WP_119803096.1 DUF2589 domain-containing protein [Paenibacillus sp. 1011MAR3C5] | diamond | 429 | 52.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. 1011MAR3C5 | ||
| 30688052 | 30688052 | PRJNA922890_P_NODE_84933_length_212_cov_5.762238_g84523_i0 | PRJNA922890 | 84933 | 212 | 5.762238 | 12.21594456 | Lactiplantibacillus plantarum | 1590 | Bacteria | Bacteria | 79.3 | 6.21e-17 | NR | WP_252129996.1 | 1590 | g84523 | i0 | 90.2 | 3.45283018867925 | 41 | 4 | 58 | 0 | 212 | 90 | 92 | 132 | WP_252129996.1 hemoglobin alpha subunit family protein, partial [Lactiplantibacillus plantarum] | diamond | 732 | 79.7 | 0.994981179422836 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus plantarum | ||
| 31636452 | 31636452 | PRJNA922890_P_NODE_69396_length_235_cov_0.879518_g68986_i0 | PRJNA922890 | 69396 | 235 | 0.879518 | 2.0668673 | Lactiplantibacillus sp. E932 | 2952565 | Bacteria | Bacteria | 46.6 | 1.04e-4 | NR | MCM8651632.1 | 2952565 | g68986 | i0 | 60.5 | 0.485106382978723 | 38 | 9 | 48.5 | 1 | 203 | 90 | 1 | 32 | MCM8651632.1 hypothetical protein [Lactiplantibacillus sp. E932] | diamond | 114 | 46.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactiplantibacillus | Lactiplantibacillus sp. E932 | ||
| 31699812 | 31699812 | PRJNA922890_P_NODE_75837_length_232_cov_0.883436_g75427_i0 | PRJNA922890 | 75837 | 232 | 0.883436 | 2.04957152 | Romboutsia ilealis | 1115758 | Bacteria | Bacteria | 51.2 | 3.13e-5 | NR | WP_304576584.1 | 1115758 | g75427 | i0 | 39.7 | 0.75 | 58 | 35 | 75 | 0 | 2 | 175 | 219 | 276 | WP_304576584.1 hypothetical protein [Romboutsia ilealis] | diamond | 174 | 51.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Romboutsia | Romboutsia ilealis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;